| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2048 |
|---|
| Symbol | |
|---|
| ID | 4015312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2128954 |
|---|
| End bp | 2129556 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637941720 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_548876 |
|---|
| Protein GI | 91787924 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2862] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0224363 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAC CCACACCAAC AAAACCAGCT CCGCTTCGTC CCCTGCCCAA CCTGATTTTC
GCAAGCCGCT GGCTGCAATT GCCGCTTTAC CTGGGCCTGA TTGCGGCTCA GGCCGTCTAT
GTGGTTCACT TCCTGGTGGA GCTCATGCAC CTGGTCGAAG CTGCGTTTGG CAGCCAGACG
GCCCTGCAGG CGCTGATCAC CAGCATCGGC TACAAGACGG CCACCCCGAT CATCTCGCTG
AACGAGACAG TCATCATGCT AGTGGTTCTG GCGCTGATTG ACGTGGTCAT GATTTCCAAC
CTGCTGATCA TGGTAATCGT GGGCGGCTAT GAAACCTTTG TCAGCCGCAT GAATCTCGAA
GGCCATCGCG ACCAGCCTGA ATGGCTGAGC CATGTGAATG CGTCGGTGCT CAAGGTCAAG
CTGGCCACGG CCATCATCGG CATCAGCTCC ATTCACCTGC TCAAAACCTT CATCAACGCG
GACAACTACA CCGACCGCGT CCTGATTGCG CAAACCGCCA TCCACATCAC CTTCCTGCTG
TCCGCGCTGG CCATAGCCTA CACCGACAAG GTAATGTCGG CCATTGCGGC GCAAAAACAC
TGA
|
|---|
| Protein sequence | MSEPTPTKPA PLRPLPNLIF ASRWLQLPLY LGLIAAQAVY VVHFLVELMH LVEAAFGSQT
ALQALITSIG YKTATPIISL NETVIMLVVL ALIDVVMISN LLIMVIVGGY ETFVSRMNLE
GHRDQPEWLS HVNASVLKVK LATAIIGISS IHLLKTFINA DNYTDRVLIA QTAIHITFLL
SALAIAYTDK VMSAIAAQKH
|
|---|
| |