| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2046 |
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| Symbol | |
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| ID | 4015310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2125751 |
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| End bp | 2127385 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637941718 |
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| Product | fumarase |
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| Protein accession | YP_548874 |
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| Protein GI | 91787922 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.519105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0269276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCCC CGAAAAGACC GCCCCGAAAA GGCAACCCGG AAAAAGCCAT TACCCCACCC
AAGCACCTGA CAGACCTGAC CATGACGACC ATCATCAAAC AAGCCGACCT GATTGAATCC
GTTGCCGCCG CCCTGCAGTA CATCAGCTAC TACCACCCCA CCGACTACAT CGCCCATCTG
GCCCGTGCCT ACGAGCGCGA GCAAAGCCCG GCGGCCAAGG ATGCCATTGC GCAAATCCTG
ACCAACAGCA AGATGAGCGC CACGGGCCAG CGGCCAATCT GCCAGGACAC CGGCATCGTC
AACGTGTTTT TGAAGGTCGG CATGGACGTG CGCTGGGAAG GCTTTACCGG CAGCATCGAC
GACGCCATCA ACGAAGGCGT GCGCCGCGGC TACAACCACC CCGACAACAC GCTGCGCGCC
TCCGTGGTGG CCGATCCGCA GTTCGACCGC AAGAACACCA AGGACAATAC GCCCGCCGTG
ATCTTTACAG AGCTGGTGAC CGGCAACACG GTTGAAGTCA CGGTGGCAGC CAAAGGCGGC
GGCAGTGAAA ACAAGAGCAA GATGGTGATG CTCAACCCCG GCGACTCGGT GGTCGACTGG
GTGCTCAAAA CCGTGCCCAC CATGGGCGCC GGCTGGTGCC CGCCCGGCAT GCTGGGCATC
GGCATTGGCG GCACCGCTGA AAAAGCCGTG CTGATGGCCA AGGAAAGCCT GATGGACGAC
CTGGACATGT ACGAGCTGCA GGCCAAGTCG TCTGCGGGTG CCAAACTGAC CAAAACCGAA
GAGCTGCGCC TCGAACTGTT CGAGAAAGTC AACGCGCTCG GCATTGGCGC GCAGGGCCTG
GGTGGTCTCA CCACCGTGCT CGACATCAAG ATCAAGATGT ACCCGACGCA CGCGGCCAGC
AAGCCTGTCG CCATGATCCC GAACTGCGCG GCCACGCGCC ATGCACACTT TGTGCTCGAC
GGCAACGGCC CGGTCTACCT GGACCCGCCT TCGCTGGACC TCTGGCCCAA TGTGAACTGG
GAGCCCGACT ACAACAAGAG CAAAAAGGTC AACCTCAACA CCCTGACCAA GGCAGAAGTC
GCCAGCTGGA AGCCCGGCGA CACCCTGCTG CTCAATGGCA AGATGCTGAC CGGTCGCGAC
GCCGCGCACA AACGCATTGC CGACATGCTG CTCAAGGGTG AAAAGCTGCC GGTCGACTTC
ACCAACCGCG TGATCTACTA CGTCGGCCCG GTGGACCCGG TCAAGGGCGA GGCCGTTGGC
CCGGCCGGCC CAACCACCGC GACCCGCATG GACGGCTTCA CCGAAATGAT GCTGGCGCAA
ACCGGCTTGA TCTCGATGGT GGGCAAGGCC GAGCGCGGCC CCGTCGCGAT TGAGGCCATC
AAGAAGCACC AGAGCGCTTA CCTGATGGCC GTGGGCGGCG CCGCCTACCT GGTATCCAAA
GCCATCAAGC ACGCCGAAGT GGTGGGCTTT GCCGACCTGG GCATGGAAGC CATTTACGAG
TTCGACGTGG TGGACATGCC GGTGACGGTG GCGGTGGATG CCGGCGGCAC CAGCGCGCAC
ATCACCGGCC CGGCCGAGTG GCAGAAAAAA ATTGCCACGG GCGAGTTCAA GCAAATCCCG
GTCACCAGCG CTTGA
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| Protein sequence | MTAPKRPPRK GNPEKAITPP KHLTDLTMTT IIKQADLIES VAAALQYISY YHPTDYIAHL
ARAYEREQSP AAKDAIAQIL TNSKMSATGQ RPICQDTGIV NVFLKVGMDV RWEGFTGSID
DAINEGVRRG YNHPDNTLRA SVVADPQFDR KNTKDNTPAV IFTELVTGNT VEVTVAAKGG
GSENKSKMVM LNPGDSVVDW VLKTVPTMGA GWCPPGMLGI GIGGTAEKAV LMAKESLMDD
LDMYELQAKS SAGAKLTKTE ELRLELFEKV NALGIGAQGL GGLTTVLDIK IKMYPTHAAS
KPVAMIPNCA ATRHAHFVLD GNGPVYLDPP SLDLWPNVNW EPDYNKSKKV NLNTLTKAEV
ASWKPGDTLL LNGKMLTGRD AAHKRIADML LKGEKLPVDF TNRVIYYVGP VDPVKGEAVG
PAGPTTATRM DGFTEMMLAQ TGLISMVGKA ERGPVAIEAI KKHQSAYLMA VGGAAYLVSK
AIKHAEVVGF ADLGMEAIYE FDVVDMPVTV AVDAGGTSAH ITGPAEWQKK IATGEFKQIP
VTSA
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