Gene Bpro_2037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2037 
Symbol 
ID4015301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2115138 
End bp2116607 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content67% 
IMG OID637941709 
ProductRND efflux system, outer membrane lipoprotein, NodT 
Protein accessionYP_548865 
Protein GI91787913 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.248346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0238408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAT CCAGGCTCCC CCAACTCCTG ACGGCGAGCG CCGCGGCGCT GCTGGCGGGT 
TGTTCGATGA TTCCCAAATA CGAGCGGCCG GCCGCGCCGA TTGCCGCAGA GTGGCCGGCC
TCCAGCTGGA TGGCTGAATC GGCCCAGGCG ACCGCCGGTG CCAGTCCCGC CGCGGCAACG
GCACCCGCCG TGCCGGCGGC CGACATTGAA TGGCAGAGTT TTTTCAGTGA TCCCAAGCTC
AGGCTACTGA TAGAGGCGGC GCTGCGCAAC AATCGCGACC TGCGGATTGC GGTACTCAAT
ATCGAGCAGG CCCGGGCCCA GTTCCAGATC CGGCGCGCCG ACCAGTTTCC GACCGTCAAT
GCCGGGCTCA CGGGCTCGCG CCAGCCCAAC GCCGATGGCA ACAGCATCAC CAGCACCTAC
TCCGCCGGCT TGCTGGTGAC GTCGTATGAG CTCGATTTCT TCGGCCGCGT CGCCAGCCTG
AAGGAAACCG CGCTGGCGCA ATACCTGGCG ACTGAAGAGG GCCGCAAGAC CACCCAGATC
AGCCTGATCG CGGCCGTGGC CAACACCTAC CTCAGCCTGC TGGCCGATGA AGAGCTGCTG
GCCATCACGC AGCAAACGCT GGCGACGCGT GAAGAATCCT TCAAGCTGAG CAAGCTGCGC
TTTGACAATG GCGTGACGTC CGAGCTGGAT TTCCGGCAGG CCGAGTCGCT GACGGAAGCG
GCCCGTGTCT CCCTGGCCCA GCTGGTCCGC CAGCGTGCTC TGGACCAGAA TGCCCTGACG
CTTTTGCTGG GCCAGCCCCT CACGGGCGAA CTGGCGGTGG CGCTGCCGGC CGGCAAGGGG
CTGGCTGATA CGCCCATGAT GGTCGATGTG CCTGCCGGAC TGCCCTCCGA CCTGCTGACC
CGCCGCCCCG ACATTCGCCA GGCCGAGCAG CAGCTGCTTG CCGCCAATGC GGATATCGGC
GCAGCCCGCG CCGCGTTTTT CCCGCGCATT TCGCTCACGG CAAGCGCCGG CAGCGCCAGC
TCGCACCTCT CGGGCCTCTT CAAGAGCGGC TCCTACGGCT GGACGCTGGC GCCCCAGTTG
CTCCTGCCGA TTTTTGATGC GGGGCGCAAC CGGGCCGGGC TCGACTCTGC CAACGCCGGC
CGCGACATCG CCGTGGCCCA GTACGAGAAA TCGATCCAGA CGGCCTTCCG CGAAGTTTCC
GATGCGCTGG CAGGCCGCGC CACGCTGGGC GAGCAGTTGC GCGCGCAGCA GGCGCAGGCC
AACGCCGAAG CCACGCGTTT CAAGCTGTCG GACCTGCGCT ACCAGAACGG TATTGCCAGC
TACCTCGATT TGCTCGATGC GCAGCGTTCG CTGTTCACCG CGCGGCAAGC CGTGGTGCAA
ACCCGTCTGG CCCAGCTGCA AAGCCAGGTC ACGCTGTACA AAACGCTGGG TGGTGGCTGG
AAGGAGCCCG CGGCCTCCGC CACGCCCTGA
 
Protein sequence
MRKSRLPQLL TASAAALLAG CSMIPKYERP AAPIAAEWPA SSWMAESAQA TAGASPAAAT 
APAVPAADIE WQSFFSDPKL RLLIEAALRN NRDLRIAVLN IEQARAQFQI RRADQFPTVN
AGLTGSRQPN ADGNSITSTY SAGLLVTSYE LDFFGRVASL KETALAQYLA TEEGRKTTQI
SLIAAVANTY LSLLADEELL AITQQTLATR EESFKLSKLR FDNGVTSELD FRQAESLTEA
ARVSLAQLVR QRALDQNALT LLLGQPLTGE LAVALPAGKG LADTPMMVDV PAGLPSDLLT
RRPDIRQAEQ QLLAANADIG AARAAFFPRI SLTASAGSAS SHLSGLFKSG SYGWTLAPQL
LLPIFDAGRN RAGLDSANAG RDIAVAQYEK SIQTAFREVS DALAGRATLG EQLRAQQAQA
NAEATRFKLS DLRYQNGIAS YLDLLDAQRS LFTARQAVVQ TRLAQLQSQV TLYKTLGGGW
KEPAASATP