| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1996 |
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| Symbol | dapD |
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| ID | 4015365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2063858 |
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| End bp | 2064697 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637941664 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_548824 |
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| Protein GI | 91787872 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.196603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAG ACAACCTGCA AAGCGCCCTC CAGAACACGA TTGACGCGGC CTGGGAAGAT
CGCGCCAACC TGTCGCCCAA ATCAGCCCCC AAAGAGGTGC TGGAAGCGGT TGAGCACACC
ATTGCCCAGC TCAACAGCGG CAAGCTGCGC GTCGCCACCC GCGAAGGCGT AGGCCAGTGG
ACCACGCACC AATGGATCAA GAAGGCGGTG CTTTTGAGCT TTCGCCTCAA GGACAACCAG
CTCATGCGCG CTGGTGACCT CGGCTTTTTT GACAAGGTTC AAACCAAGTT TGCGCACCTG
AGTGAAGATG AGATGCGCGC TACCGGCGTG CGCGTGGTGC CCCCCGCCGT CGCCCGCCGC
GGCAGCTACA TCGCCAAGGG CGCGATCTTG ATGCCCAGCT ACGTGAACAT CGGCGCCTGG
GTCGGCGAAG GCACCATGGT CGACACCTGG GCCACCGTGG GCAGCTGCGC GCAGGTCGGC
AACAATGTGC ACCTCTCCGG TGGCGTGGGA CTGGGCGGCG TGCTGGAGCC GCTGCAGGCC
AACCCGACCA TCATTGAAGA CAACTGCTTT ATTGGCGCGC GCTCCGAGGT GGTTGAAGGC
GTGATTGTTG AGGAAAACTC GGTGATTTCC ATGGGTGTTT ACATCGGCCA GAGCACGCCG
ATCTATGACC GTGAAGCGGA CACCGTCACC TACGGCCGCA TCCCGGCCGG CTCCGTCGTG
GTGTCGGGCA ACCTGCCCAA GGCCGGTGGC AAGTACAGCC TGTACTGCGC CGTGATCGTC
AAGCGGGTGG ATGCCAAGAC GCGCGCCACG ACCAGCCTGA ACGACCTGCT GCGTGATTGA
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| Protein sequence | MTQDNLQSAL QNTIDAAWED RANLSPKSAP KEVLEAVEHT IAQLNSGKLR VATREGVGQW
TTHQWIKKAV LLSFRLKDNQ LMRAGDLGFF DKVQTKFAHL SEDEMRATGV RVVPPAVARR
GSYIAKGAIL MPSYVNIGAW VGEGTMVDTW ATVGSCAQVG NNVHLSGGVG LGGVLEPLQA
NPTIIEDNCF IGARSEVVEG VIVEENSVIS MGVYIGQSTP IYDREADTVT YGRIPAGSVV
VSGNLPKAGG KYSLYCAVIV KRVDAKTRAT TSLNDLLRD
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