| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1995 |
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| Symbol | |
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| ID | 4015364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2062621 |
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| End bp | 2063826 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637941663 |
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| Product | twitching motility protein |
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| Protein accession | YP_548823 |
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| Protein GI | 91787871 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.206221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAG GCAGGACTAT GAGCACGATG GAGAGGATCC TTCGTTTGAT GGCGGATAAA
AAAGCATCGG ATGTTTACCT GTCGGCTCAT TCGCCCGCCC TCATCAAGAT CAACGGCCAG
GCCATTCCCA TCAATGCCCA GATCCTGCCG CCCGACGCGC CGCGCAACCT GCTGGCCGAA
GTGCTGCCGC CCGAGCGGAT CGAAGAACTC GAGGAAGTGG GCGAGCTCAA CATGGCGCTG
CCGATTGCCG GCCTGGGCAA TTTCCGCATC AGCGGCTTCC GGCAGCGCAG CACCTATGCG
GCGGTGATCC GCTTCATTCC GAACGAAATC CCTGCACTGG ACAGCCTGAA CGTGCCGGCC
ATCCTGTCCA GCCTGATCAT GGAAAAACGC GGCCTGCTGC TGATGGTGGG CTCCACCGGC
GCGGGAAAGA GCACCACGCT GGCAGCCATG ATGGACCACC GCAACGAAAC CACGCTGGGC
CACATCCTGA CCATTGAAGA CCCGGTTGAA TTCCTGTTCA CCAACAAGAA ATCGGTGGTC
AACCAGCGCG AGGTGGGCAG TGACACCCAA TCCCTGCAGG TGGCACTGCG AAACGCGCTA
CGCCAGGCGC CTGATGTGAT TCTGATCGGT GAAATCCGCG ACCGCGAAAC CATGTCGTCC
GCCATTGCCT ATGCGCAGTC GGGCCATTTG TGCCTGGCGA CCATGCACGC CAACAACAGC
TACCAGGCGC TGAACCGCAT CCTGAGCTTT TACCCGGTGG AGGTTCGCCC CACCATGCTG
GGCGACCTGG CCGCAGCCCT GAAGGCGATC GTGTCGCAGC GGCTGCTGCG TACCCAGGAC
GGCAACCGCT CGCCGGCAGT GGAAGTCATG CTCAACACCA AGCTGGTATC CGAGCTGATC
GAAAAAGGCG ACTTCTCGGG GGTCAAGGAG GCCATGGAGA AATCCATGGC CGAGGGCTCG
CAAACCTTTG AACAGGACAT CGCCCGGATG ATCGTGGAAG GCACCGTTAC CCGCAAGGAA
GGCATTTTGC ATGCGGATTC GCCAACCAAC CTGATGTGGC GCCTTGAGAA CGACTTTGCC
GGGGCTGCCA AGGACAAGGC GAAGGAGGCC GAAGAAGAGC CGGATGACGA GGCCTCGTTC
ACGGAGATCA CCCTCGACGT TCACCACGGC TCGAAATACG GCACCACGGG CTTCGGCTCG
CTCTGA
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| Protein sequence | MTEGRTMSTM ERILRLMADK KASDVYLSAH SPALIKINGQ AIPINAQILP PDAPRNLLAE
VLPPERIEEL EEVGELNMAL PIAGLGNFRI SGFRQRSTYA AVIRFIPNEI PALDSLNVPA
ILSSLIMEKR GLLLMVGSTG AGKSTTLAAM MDHRNETTLG HILTIEDPVE FLFTNKKSVV
NQREVGSDTQ SLQVALRNAL RQAPDVILIG EIRDRETMSS AIAYAQSGHL CLATMHANNS
YQALNRILSF YPVEVRPTML GDLAAALKAI VSQRLLRTQD GNRSPAVEVM LNTKLVSELI
EKGDFSGVKE AMEKSMAEGS QTFEQDIARM IVEGTVTRKE GILHADSPTN LMWRLENDFA
GAAKDKAKEA EEEPDDEASF TEITLDVHHG SKYGTTGFGS L
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