Gene Bpro_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1972 
Symbol 
ID4015378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2039245 
End bp2040069 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID637941639 
ProductIojap-related protein 
Protein accessionYP_548800 
Protein GI91787848 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.972723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTA CCACTGCCAA AACCTCCAGC ACCGCCGACA AGAAAGATGT GCAGAAATTG 
CAGCGCGCCA TCGTTGACGG CCTGGAAGAC GTCAAGGCAC AGGACATACA GGTCTTTGAC
ACAGAACACA TCACCTCGCT CTTCGAGCGC GTGATCGTTG CCTCCGGAAC CTCCAACCGT
CAGACCAAGG CTCTTGCGGC CAGTGTGCGC GACGCCGTGC GCGACGCGGG TTTTGCCAAG
CCACGCATTG AAGGCGAAGC CAACGGAGAG TGGATCATCG TGGATTGCGG TGCTGCCGTG
GCCCACATCA TGCAGCCCAC GATCCGCCAG TACTACCATC TTGAAGAGCT CTGGGGCGAC
AAGCCGGTCA AGCTGAAACT GGGCGCTCCG GCACCGCTGG TGAAGGCGTC CAAGGCCGAG
CCCGCGGCGG AGCCGAAAGC GGGCGCCAAA CCGAAAGCCG CGAAAGCCGG TGCAAAGTCC
ACCGCCGTGC GCGGTGCACG CACTGCCAAA CCCGCTGTGA AAACAGCCGT CAAGGACCAT
GCCCCGGGGT ATGTGGGCAA GGTCGGGAAA ACCAGCGACT GGACCGCCAA ACGGAACCAG
GCGGCACCCG CCGCCGAGCC GGCAGTGAAA GCGGGCAGGG CAACGGCCAA GCCTGCGGCC
GCGAAATCTG CCGCCAAGCC AGCCACCAAA ACACCGATCG TGAAAGTGCC AGCGCCCAAA
AGGGCACCGG CCAAGAAGGC TGCCACCAAG ACCGCGGCCA GGACTACAGC CAAGACTGCA
GCCGGGAAGC CGGCCGCCAG GAAATCTGTC CCCCGGAGCA AATGA
 
Protein sequence
MTSTTAKTSS TADKKDVQKL QRAIVDGLED VKAQDIQVFD TEHITSLFER VIVASGTSNR 
QTKALAASVR DAVRDAGFAK PRIEGEANGE WIIVDCGAAV AHIMQPTIRQ YYHLEELWGD
KPVKLKLGAP APLVKASKAE PAAEPKAGAK PKAAKAGAKS TAVRGARTAK PAVKTAVKDH
APGYVGKVGK TSDWTAKRNQ AAPAAEPAVK AGRATAKPAA AKSAAKPATK TPIVKVPAPK
RAPAKKAATK TAARTTAKTA AGKPAARKSV PRSK