Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1954 |
Symbol | |
ID | 4015398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2021618 |
End bp | 2022238 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637941622 |
Product | 17 kDa surface antigen |
Protein accession | YP_548783 |
Protein GI | 91787831 |
COG category | [S] Function unknown |
COG ID | [COG3134] Predicted outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000188726 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.792503 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTT CTGCCATTCT TTGCCTGACC ACGCTGCTGG CAGCGGGCGC CCAGGCCCAG ACCTTCAACG ACACGGCCCG CGTGCGCAAT GTCAACCCAC AGTACGAGAA CGTCTCCGTG CCGCGCAACG AGTGCACCAG CCAGTGGGTG ACCGAGCAGC AACCCGTGGC GGCTTCGCGC AATTACGGCG GGCTGGCGGT TGGCGGTGTG GCCGGCGCCG TGCTGGGCAA CCAGGTCGGC AAGGGGCACG GCCGCGAAGC CGCCACCGCG CTCGGTGCCG TGGTCGGCGC GCTGGCCGGC GAGCACTTTG CCAACCAGAA CGGCTGGGGT GGTGGCTACC AGCAGGCAGC GCAGCCGCAG CAGCGCCAGG TGCAAACCTG CAACACCGTC AACGACGTGC AGTCCCGCCT GACGGGCTAC CAGGTCGAGT ACGAGTACCG CGGTCAGGTC TACAGCACGG TGACCCGCGA GAACCCGGGC CGCACCTTGC CCGTGCGCGT CTCGGTGGCC CCGGTGGAGC CGGTGGCGTC GGTGGGGCGC GAGCTCCAGG GCGCACGCGA ATACCAGGGC CGGCGCGATG ACCGTGGCGG TCGCGAGTAC TATGGTGCTT ACAACCGATG A
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Protein sequence | MKRSAILCLT TLLAAGAQAQ TFNDTARVRN VNPQYENVSV PRNECTSQWV TEQQPVAASR NYGGLAVGGV AGAVLGNQVG KGHGREAATA LGAVVGALAG EHFANQNGWG GGYQQAAQPQ QRQVQTCNTV NDVQSRLTGY QVEYEYRGQV YSTVTRENPG RTLPVRVSVA PVEPVASVGR ELQGAREYQG RRDDRGGREY YGAYNR
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