| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1866 |
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| Symbol | |
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| ID | 4015499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1925805 |
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| End bp | 1928849 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637941535 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_548697 |
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| Protein GI | 91787745 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.276293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.279729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGTCGGC CCTGCGCGGC GCACGTCCGT CTGTCTGTCT TTTATCGGAA TAAACACATG
TTGATGCCAT CCGCCAAGCC GCTGGGCGAG CTTGAAAACC CCTCTGAATT CATCCCGCGC
CACATCGGCA TTGATGAGGC CGATGAAGTG CACATGCTCA GTGTGGTGGG CTCCGCCTCG
CGCCGCGACC TGATTGACGG GATTGTTCCG CGTTCGATCG CGCGCACCAG CACCATGGCC
ATTCCGGCGC CAGTGACTGA AGCGGCAGCC CTCAAGCAGC TCAAGGCGAT CGCAGCCAAA
AACCAGGTGT TCAAGAACTT CATCGGCCAG GGCTACTACG GCACCTACAC GCCGGGCGTG
ATCCTGCGCA ACATCCTTGA AAATCCCGCC TGGTACACCG CTTACACGCC CTACCAGGCC
GAGATTTCGC AGGGCCGCAT GGAGGCGCTG ATCAACTTCC AGACCATGGT CTGCGACCTG
ACCGGCATGC CGATTGCCAA TGCCTCCATG CTCGATGAGG CCACCGCCGC CGCCGAGGCC
ATGACGCTGG CCAGGCGCAG CGTGAAAAGC AAAAGCAATG TGTTCATCGT CGCCGGCGAC
TGTCATCCGC AAACGATTGA AGTCATCCAG ACCCGCGCCA GGCCGCTGGG CATTGAAGTC
AAGGTCAGCA CCGCAGTGAC TACCCTGCCG CAGCTCATGG CCGAAGGCAA TTACTTTGGC
GTGCTGGCCC AGTACCCGGC CACCACCGGC AGCATCCACG ACCTGCGCCC GCTGGCCGGC
CAGGCGCATG TAGACGGCGC GGCCCTGTGC GTGGCCGCCG ACCTGCTGGC ACTGACCCTG
CTCACGCCGC CCGGCGAATG GGACGCCGAC ATCGTGCTGG GCAACACCCA GCGCTTTGGC
ATGCCCATGG GCAACGGTGG CCCGCACGCG GCCTACCTCG CCTGCCGCGA CGAGTTCAAG
CGCTCCCTGC CCGGCCGCCT GGTGGGCGTG AGTGTCGACG TCCACGGCAA TCCGACCTAC
CGCCTGGCGC TGCAGACGCG CGAGCAGCAT ATCCGCCGCG AAAAAGCCAC CTCCAACATC
TGCACCGCCC AGGTGCTGCC CGCCGTGATT GCCAGCATGT ATGCGGTCTA CCATGGGCCG
CAGGGCCTCA GGCGCATCGC AGAGCGCGTG GCGGCATACA CCGCCATCTT CGTGCGCGGC
CTGCAGGAAC TCGGCTATGA GATCACCGAC CTGGGGGCCT TTGACTCCGT CACCGTCAAG
ACCGGAGATG CCACCAATTT AATAGCTGAA CGCGCCCGTC AGTCCGGGGC CAACCTGCGA
TGTCGCCTGA ACAATCACCT GGGCGTGTCA CTGGACGAAA CCACCAGCCG CAAGGACATT
GAACTGCTGT GGTCCTTCTT TGCCCAGCCC GGCCAGACGG TGCCCGTGGT CAGCGCCTTT
GAAGAGGGCA TCGAGTCCCT GATTCCGGCC GACCTGCGCC GCACCAGCGC CTTCCTGACC
CACCCGGTGT TCAACACCCA CCACTCCGAA ACCGGCATGC TGCGCTACAT CCGCATGCTC
AGCGACAAGG ACCTGGCGCT GGACCGCAGC ATGATCCCGC TGGGCAGCTG CACCATGAAG
CTCAACGCGA CCAGCGAGAT GATTCCCATC ACCTGGCCCG AGTTTGCCAA CATCCACCCC
TTTGCCCCCC AGGAGCAACT GCAGGGCTAT GCCGAACTCG ACAAGCAGCT GCGCGACTGG
CTGTGCCAGG CCACCGGGTA CAAAGGTATC AGCCTGCAGC CCAATGCGGG TTCGCAGGGC
GAATACGCCG GCTTGCTGGT GATCAAGGCC TTCCACGAAG CACATGGCCA GGGCCATCGC
AACATCTGCC TGATTCCCTC ATCGGCCCAC GGCACCAACC CGGCCAGCGC CCAGATGGCG
GGCATGACGG TCGTCGTCAC GGCCTGCGAT GCGCAGGGCA ATGTGGACAT GGAGGACCTG
AAAGCCAAGT GTGAGAAGCA CAGCGCCAAT CTGGCCTGCA TGATGATCAC CTACCCCAGC
ACGCATGGCG TCTTTGAAAC CCATGTGCAA GACCTTTGCC AGCTGGTGCA TTCGCACGGC
GGCCGGGTCT ATGTCGATGG CGCCAACATG AACGCGCTGG TCGGCGTGGC AGCCCCCGGC
GAATTCGGCG GCGACGTCAG CCACCTGAAT CTGCACAAGA CTTTCTGCAT CCCGCACGGC
GGCGGCGGGC CGGGCGTGGG TCCGGTTTGC GTGGTGGCCG ACCTGGTGCC TTACCTGCCC
GGCCATGCCA CAGCCGGATA TGCAGGAGGC GGCCGAGCCT TCGGAGAGGG CACCAGCTTT
TCCGCCGGGC CGCCCCAAGG AAAAGAAGCC CCCTCGGGGG GCAGCGCATT ACACGAAGTG
AAAAGCGTGG GGGCCATTTC CGCCGCGCCT TTGGGCAATG CAGCCGTGCT GCCGATCAGC
TGGATGTACT GCCGCATGAT GGGCGCCGAA GGCCTGAAGC AGGCCACCGA GATCGCCATC
CTGAGCGCCA ACTACATCAG TTCGCGACTG AAAGACCACT ACCCAACGCT GTACGCCAGT
GAAAACGGCC ATGTCGCGCA TGAGTGCATT CTGGACCTGC GTCCGCTGAA GGAAACCAGC
GGCGTCACCG CCGAAGACGT CGCCAAGCGG CTGATCGACT ACGGTTTTCA CGCGCCGACG
CTGAGCTTCC CGGTCGCCGG CACGCTGATG GTGGAGCCAA CCGAGAGCGA AACGCTGGAC
GAGCTGGACC GCTTCATCGA CGCGATGATC GCCATTCGGC AGGAAATCCG CCGCATCGAA
AAAGGCGAGT GGCCGCAGGA CGACAACCCG CTGAAGGCCG CGCCGCATAC GGCGGCAAGC
CTGCTCAAGG GCGAATGGAT GCATGCCTAC ACACGCGATG TGGGGGCAGC CATACTCAGC
AAGACCCAGC ACGCCAAATA CTGGCCGCCA GTGGGCCGCG TCGACAACGT CTATGGCGAC
CGCAACCTGT TTTGCAGTTG CGTGCCCGTG AGCGACTACG CCTGA
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| Protein sequence | MGRPCAAHVR LSVFYRNKHM LMPSAKPLGE LENPSEFIPR HIGIDEADEV HMLSVVGSAS
RRDLIDGIVP RSIARTSTMA IPAPVTEAAA LKQLKAIAAK NQVFKNFIGQ GYYGTYTPGV
ILRNILENPA WYTAYTPYQA EISQGRMEAL INFQTMVCDL TGMPIANASM LDEATAAAEA
MTLARRSVKS KSNVFIVAGD CHPQTIEVIQ TRARPLGIEV KVSTAVTTLP QLMAEGNYFG
VLAQYPATTG SIHDLRPLAG QAHVDGAALC VAADLLALTL LTPPGEWDAD IVLGNTQRFG
MPMGNGGPHA AYLACRDEFK RSLPGRLVGV SVDVHGNPTY RLALQTREQH IRREKATSNI
CTAQVLPAVI ASMYAVYHGP QGLRRIAERV AAYTAIFVRG LQELGYEITD LGAFDSVTVK
TGDATNLIAE RARQSGANLR CRLNNHLGVS LDETTSRKDI ELLWSFFAQP GQTVPVVSAF
EEGIESLIPA DLRRTSAFLT HPVFNTHHSE TGMLRYIRML SDKDLALDRS MIPLGSCTMK
LNATSEMIPI TWPEFANIHP FAPQEQLQGY AELDKQLRDW LCQATGYKGI SLQPNAGSQG
EYAGLLVIKA FHEAHGQGHR NICLIPSSAH GTNPASAQMA GMTVVVTACD AQGNVDMEDL
KAKCEKHSAN LACMMITYPS THGVFETHVQ DLCQLVHSHG GRVYVDGANM NALVGVAAPG
EFGGDVSHLN LHKTFCIPHG GGGPGVGPVC VVADLVPYLP GHATAGYAGG GRAFGEGTSF
SAGPPQGKEA PSGGSALHEV KSVGAISAAP LGNAAVLPIS WMYCRMMGAE GLKQATEIAI
LSANYISSRL KDHYPTLYAS ENGHVAHECI LDLRPLKETS GVTAEDVAKR LIDYGFHAPT
LSFPVAGTLM VEPTESETLD ELDRFIDAMI AIRQEIRRIE KGEWPQDDNP LKAAPHTAAS
LLKGEWMHAY TRDVGAAILS KTQHAKYWPP VGRVDNVYGD RNLFCSCVPV SDYA
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