| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1854 |
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| Symbol | |
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| ID | 4015487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1915526 |
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| End bp | 1916419 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637941523 |
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| Product | xylose isomerase-like TIM barrel |
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| Protein accession | YP_548685 |
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| Protein GI | 91787733 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.151277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.216619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACT ACAGCGGAAA CATAGACGAT TTCGGGATGG ACACCATCTC GCTGGCCGGC
CCGCTCGAGG CCAAGCTCAA GGCTGTTCGC GAGGCGGGGT TCACCCAGAT CATGCTGGCC
GCGAGGGACC TGGTGGGCCA CCCCGACGGC CTTGACGCCG CGATTGCGGC GGTGCGTACC
AGCGGCTTGC GCGTGACCGG CTTTCAGGTG CTGCGCGATT TTGAGGGCCT GTCGGGCCAT
CTTCACGATT ACAAGGTCGA CATTGCCAAA TCGATGCTGG AGATGTGCCA CGCGCTGGAC
TGCCGGCTGT TGCTGATCTG TTCATCCACG TCCGTGCATG CCACGGACGA CACCCGGGCG
CTGGTGAAGG ACTTGCGCAA ACTGGCCATG CTGGCGATTC CCATGAATAT CCGCATAGCC
TATGAAGCCT TGTCGTGGGG GCGTGTCGTC AATGAATTCC CACAGGCCTG GGACATCATT
TGCGAGGCTG ACATGCCCAA TCTCGGCCTG GGATTTGACT CCTTCCACAT GTTTGCGACC
AAGACCTCGC TGGACGAGCT GGACATGCTG GATCCCGACA AGATATTCCT GGTGCAGCTG
GCCGACTTCA TGTGGACCGA GATCAAGTCG GTCGAGGAAC GCATTGCCAC CGCGCGGCAT
TTTCGCGTGT TTCCCGGGGA AGGCGTACAC AGCGAAGCAC TCGCCACGCT GGTGACCAAA
CTCCACGGGC TGGGTTACCG CGGTGACTAC AGTTTCGAGG TCTTCAATGA CGACTACCAG
CAAATGCCTT TACCCACCGT GGCGCAACGC GCCTGGCGTT CGGCCTTGTG GCTGGGCGAG
GACGTCTTGC GGCGTTCCGT GCCCTTGCCC AACCAGATCC GCCTGAAGCG TTGA
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| Protein sequence | MSHYSGNIDD FGMDTISLAG PLEAKLKAVR EAGFTQIMLA ARDLVGHPDG LDAAIAAVRT
SGLRVTGFQV LRDFEGLSGH LHDYKVDIAK SMLEMCHALD CRLLLICSST SVHATDDTRA
LVKDLRKLAM LAIPMNIRIA YEALSWGRVV NEFPQAWDII CEADMPNLGL GFDSFHMFAT
KTSLDELDML DPDKIFLVQL ADFMWTEIKS VEERIATARH FRVFPGEGVH SEALATLVTK
LHGLGYRGDY SFEVFNDDYQ QMPLPTVAQR AWRSALWLGE DVLRRSVPLP NQIRLKR
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