| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1851 |
|---|
| Symbol | |
|---|
| ID | 4015484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1912923 |
|---|
| End bp | 1913681 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637941520 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_548682 |
|---|
| Protein GI | 91787730 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.28249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.201191 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGCC CTCTGCTGAA AGTCACCGAC CTCAGGAAAT CCTACGGTGC CATCCAGGCG
GTCGGCGGTG TGTCATTTGA AGTCATGCCG GGCGAGATCT TTGGCGTGAT CGGGCCCAAC
GGCTCGGGCA AGACCACCAT GTTCAACAGC GTGCTGGGCC AGATCAGCCC GGACACCGGC
GCCATCGAGC TCAACGGCAA AAACATCACG GGTTTGTCAC CGCTGGAGTT GAGCCGGCGC
GGCGTGGGCC GCACCTTCCA GACCCTGCAG GTGTTTGGCA AGATGACAGT GCGCGACAAC
CTGATCGTGG CCGCGCAGGA GCACAAAGGC AGCATGCTCA GCCGCATGTT TGCCCCCGGC
GACTCGGGGC TGGGCGCGAA GGCCGATGCG CTGATCGACC AGTTCCGCAT CCGCCATGTC
GCCGACAAGC CGGCCGGCAC GCTGAGCTAC GGCCAGCAAA AGCTGGTGGA CATTGCCATG
GCCTTCATGG CCGAGCCCGA CCTCGTGCTG CTCGACGAGC CATGTGCCGG TGTCAACCCC
AGCCTGGTGG GCGGCATCTC GACCCTCCTC AAGGAATTGA ACCAGAACCC GAAGTTCGGG
CGCAAGGGAT CGTTTGTGGT GATTGAGCAC AACATGGACT TTGTGATGGA TTTGTGCCAC
CGCATCATGG TGATGGTGGA GGGGCGGGTG CTGGCGATTG GCACACCGGC TGAAATTCGG
GGCAACAAAG AGGTGCTTGA TGCTTATTTA GGGAATTAG
|
|---|
| Protein sequence | MMSPLLKVTD LRKSYGAIQA VGGVSFEVMP GEIFGVIGPN GSGKTTMFNS VLGQISPDTG
AIELNGKNIT GLSPLELSRR GVGRTFQTLQ VFGKMTVRDN LIVAAQEHKG SMLSRMFAPG
DSGLGAKADA LIDQFRIRHV ADKPAGTLSY GQQKLVDIAM AFMAEPDLVL LDEPCAGVNP
SLVGGISTLL KELNQNPKFG RKGSFVVIEH NMDFVMDLCH RIMVMVEGRV LAIGTPAEIR
GNKEVLDAYL GN
|
|---|
| |