| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1800 |
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| Symbol | |
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| ID | 4015548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1862712 |
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| End bp | 1863431 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637941471 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_548633 |
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| Protein GI | 91787681 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000268682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCAATTAC AGGACATTCT TTTCTCCCAG GGCTTTGGCA CGCGGCGCGT TTGTGCGGGC
CTGATTCAAC AGGGTTTTGT GGCCGTAGCT GGCATCCCCT GTACGGAGCC AGCGATGGAA
TTTGTAGCGG AAGACTTGCG CTTCACGGTG CAGGGGGTGG CGTGGGAGTA TCACGAAAAA
GCCTACCTGA TGCTGCATAA GCCGGCCGGT TATGAGTGTT CGCAGAAGCC CAGCACCTAC
CCCAGTATTT ACACTTTGCT GCCGTCACCG ATTCGCCAGC GTGGCGGTGG CGCTGCGGCG
GGTGTACAGG CCGTGGGGCG GCTGGACCAG GACACGACCG GCTTGCTGCT GCTGTCGGAC
GACGGCAAGT TCATTCACCG CATGAGCTCC CCCAGGCACC ATGTACCCAA GGTTTATGAA
GTGACCGCAA AGCATGCGGT GGACGACAGG CAGGTTCAGA AACTGCTGGC GGGTGTGGTG
CTGGATGACG ATCCAAAGCC GGTGCGGGCC GCCGCCTGTG AAAAGACCGG CGAGCTGCAG
TTAAGCCTGA CGCTGACCGA GGGCAAGTAT CACCAGGTCA AACGCATGAT TGCGGCCGTC
GGCAACCGGG TGGAAGACCT GCACCGCTCG CAGCTGGGGG GGCTGATGTT GCCTGAAGAT
CTCAAGCCCG GTCAGTGGCG CTGGCTCACG GCGCAGGATC TGTCCAGCAT TTCGACCTGA
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| Protein sequence | MQLQDILFSQ GFGTRRVCAG LIQQGFVAVA GIPCTEPAME FVAEDLRFTV QGVAWEYHEK
AYLMLHKPAG YECSQKPSTY PSIYTLLPSP IRQRGGGAAA GVQAVGRLDQ DTTGLLLLSD
DGKFIHRMSS PRHHVPKVYE VTAKHAVDDR QVQKLLAGVV LDDDPKPVRA AACEKTGELQ
LSLTLTEGKY HQVKRMIAAV GNRVEDLHRS QLGGLMLPED LKPGQWRWLT AQDLSSIST
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