| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1798 |
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| Symbol | |
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| ID | 4015545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1860839 |
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| End bp | 1861504 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637941470 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_548632 |
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| Protein GI | 91787680 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0263592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000282508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTTTAATA ATATTGATGC CGTGCTGTTT GACCTGGACG GTACCCTGAT TGATAGCGCA
CCCGACCTGG GGGCCGCGGC CGACAAGATG CGCACTGACC GGGGATTGGC CTCGCTACCT
TTGTCGCAAT ACCGGCCCAT GGCGGGCGCA GGGGCCCGCG GCATGATTGG CGTCGCATTT
GGCCTGACAC CTGACGATGC CGGTTTTCCC GCATTGAGGG AAGAGTTTTT TGCCAACTAC
GAGGCCTGCA TGACCGAGCG CACCTATGCG TTCGACGGGG TGGCCGAGCT GATTGCGAAA
ATTGACCAGG CAGGCCTCAA GTGGGGGGTG GTCACCAACA AGTCCGCCCG CTTCACGCTG
CCCCTCACGC AGGCCATGCC GCTGTTTGGT ACGGCCCAGG CCATTGTCAG CGGGGATACC
ACGCCGCATG CCAAACCGCA TCCCGCTCCC CTGCTGGAAG CGGCCCGCAG GCTCAAGGTG
GCGCCCGCGC GCTGTATCTA TGTCGGCGAC GACGAACGCG ACATGGTCGC CGGCCGTGCC
GCCGGCATGC CCACCGTGGC GGCGGCCTAT GGTTATCTGG GCGCTACCGC CGACATGCAG
GGCTGGTTCG CCGACGCCAC CATCACAAAA CCCGCGCTGC TCTTGAATTT GCTGCGAATG
CCTTAA
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| Protein sequence | MFNNIDAVLF DLDGTLIDSA PDLGAAADKM RTDRGLASLP LSQYRPMAGA GARGMIGVAF
GLTPDDAGFP ALREEFFANY EACMTERTYA FDGVAELIAK IDQAGLKWGV VTNKSARFTL
PLTQAMPLFG TAQAIVSGDT TPHAKPHPAP LLEAARRLKV APARCIYVGD DERDMVAGRA
AGMPTVAAAY GYLGATADMQ GWFADATITK PALLLNLLRM P
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