Gene Bpro_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1796 
Symbol 
ID4015543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1859401 
End bp1860045 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content56% 
IMG OID637941468 
ProductOmpA/MotB 
Protein accessionYP_548630 
Protein GI91787678 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0221039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000303101 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAGAAAC TCAACAAAGT GGCAATGTTG TTTGCTTCCG CAGCGCTTGT TACCGCCGCT 
GGTGCACAAA CTATCGACAA CTGGAAAAAC GGCAACAATG AGTTGGTCTG GAAAAACGGC
ACCAATGAAC TGTGCTGGCG CGATGCCAAC TGGACGCCTG CTACTGCGGC TCCTGGCTGT
GATGGTGCGA TCGTTGCTCC TCCTGCTCCC GCTCCTGCCG CCGCCCCCGC GCCTGCCCCT
CGCGCAGCTG CCCCGGCGCC TGCCCCAGTT GCTCCTCCTG CCGCTACCAA AGTTACTTAC
GCCGCTGACG CATTCTTTGA TTTCGACAAG TCCGTCATCA AGCCAGAAGG CAAAGCCAAG
CTGGATGACC TGATCGGCAA GATCAAGGAC ATCAACCTGG AAGTGATCAT TGCTGTGGGT
CATACCGACT CCGTCGGCAG CGATACTTAC AACCAGAAGC TGTCGGTTCG TCGTTCGGAA
GCCGTCAAGG CTTACCTGGT GTCCAAGGGC ATTGAGAAAA ACCGCGTTTA CACCGAAGGC
AAAGGCGAGA AACAGCCCGT TGCTGACAAC AAGACCGCCG AAGGCCGCGC GAAAAATCGT
CGCGTGGAAA TCGAAGTTGT TGGTACCCGT GCCAACAAGA AGTAA
 
Protein sequence
MKKLNKVAML FASAALVTAA GAQTIDNWKN GNNELVWKNG TNELCWRDAN WTPATAAPGC 
DGAIVAPPAP APAAAPAPAP RAAAPAPAPV APPAATKVTY AADAFFDFDK SVIKPEGKAK
LDDLIGKIKD INLEVIIAVG HTDSVGSDTY NQKLSVRRSE AVKAYLVSKG IEKNRVYTEG
KGEKQPVADN KTAEGRAKNR RVEIEVVGTR ANKK