| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1729 |
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| Symbol | |
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| ID | 4015631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1784944 |
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| End bp | 1787778 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637941401 |
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| Product | DNA polymerase I |
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| Protein accession | YP_548563 |
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| Protein GI | 91787611 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCTG ACAAAAAAAC ACTGCTGCTG GTGGACGGCT CCAGCTACCT GTACCGCGCC
TTCCACGCCA TGCCCGACCT GCGCGCTAAC CCGGGCGATC CCACCAGCCC GGCCACCGGC
GCCATCCGCG GCATGATCAA CATGATGCAG AAGCTGCGCA AGGACGTACG CGCCGACTAC
GCCGCCTGCG TGTTTGACGC CAAGGGCCCG ACCTTTCGCG ATGCGCTTTA CCCGCAGTAC
AAGGCCCAGC GCTCGCCCAT GCCCGACGAC CTGCGCAGCC AGGTGGAGCC TATCCATGAA
GTGGTGCGCC TGCTCGGCTG GAAGGTGCTG GATGTGCCCG GCGTGGAGGC CGACGACGTG
ATTGGCACGC TGGCCTGCCT GGCCTCGAAG CAGGGCATTG AAGTCATCAT CTCCAGCGGC
GACAAGGACC TGAGCCAGCT GGTCGACGAG AACATCACCG TCATCGACAC CATGAACGAC
CGCCGGCGCG ACCTGGCCGG CGTCGAAGCC GAATTCGGCG TGCCGCCGCG CCTGATGGTG
GACTACCAGG CGCTGGTGGG TGATGCCGTG GACAACGTGC CCGGCGTGCC CAAGGTCGGT
CCCAAAACGG CGGTGAAGTG GTTGCTGGAA TACGGCTCGC TCGATGCCCT GGTGGCGCGC
GCGGGTGAAA TCAAGGGCGT GGTTGGCGAC AACCTTCGCC TGTCGCTGGA CTGGTTGCCC
AAAGGCCGGG AACTGCTGAC GATCAAGAAA GACTGCGACC TGATCGGGTA CATCGATGGC
CTGCCTGCCC TGGAGTCCAT TGCCATCGGT GGTCAGCAGA CGGATGCCTT GAAGGCTTTT
TATGAGAAAT ACGGCTTCAA GGGGCTGGTC AGGCAAATCG ACACCGAAAG TGCGCCGCCC
GAATTGATTG GCGGACCCGA GGGCCGGCAT GCCAAATCGC CGGGCTCCGT GGGTTCCGCG
GGTTCTTCGG CTTCGCCCGG CCTGTTTGAC GAACCCTCGC TGCCGGACGC CCCTTTGGCC
GGGCGGGCCA GCAATCTCAA GTACGACACC ATCTTCACCT GGGAGTTGCT TGACAGCTGG
CTGGCCAAAA TTGAAGCCGC AGAATTGGTG GCGGTGGACA CCGAAACCAC CTCGCTGGAC
GAAATGCTGG CCCAGATCGT GGGCATCAGC TTCAGCGTGA CACCCGGCGA GGCAGCCTAC
ATTCCGCTGA CGCATGATTA CCCCGATGCG CCCGCACAAC TGCCACGCGA CGAGGTACTG
GCCCGCCTGA AGCCCTGGCT GGAAAACCCG GCTATAGCCA AGCTGGGCCA GCACGTCAAA
TACGACCGCC ACGTATTTGC CAACCACGGT ATTGAAGTGC AGGGCTATGC CCACGACACC
ATGCTGCAAA GCTATGTGCT GGAAGTGCAC AAGCCGCATG GGCTGGCCAG TCTGGCCGAG
CGGCATGTAG GGCGCAGCGG CATCAACTAC GAAGACCTGT GCGGCAAGGG CGTGCACCAG
ATCAAGTTCA ACCAGGTCGA TATTGCCAAG GCCGCCGAAT ACTCGTGCGA AGACTCCGAC
CAGACGCTGG ACGTGCACCG CGTGCTGTGG CCCCAGATCG AGGCCAACGA CAAGCTGCGC
TTTGTTTACG AACTTGAAAT GAAAAGCAGT GAAACGCTCT ACCGCATCGA GCGCAACGGC
GTGCTGATTG ACGCCCCCAC GCTGGCCAAA CAAAGCGGTG AGCTGGGCGC GCGTATTGTG
CAGCTGGAAG CCGAGGCCCA CGAGTTGGCG GGCCAGCCCT TCAACCTGGG CAGTCCCAAG
CAGATCGGTG AAATCTTCTT TACCAAACTG GGTCTGCCGG TGGTCAAGAA AACCCCGAGC
GGCGCGCCCA GCACCGACGA GGAAGTGCTG GAAAAACTGG CAGAGGACTA CCCCTTGCCC
GCCAAGATCC TGGAGCACCG CGGGCTTTCC AAACTCAAGG GCACCTACAC CGACAAGCTG
GCGCAGCTCG CGCACCCCAG GACGGGCCGG GTGCATACCC ATTACGCACA GGCGGTCGCG
GTCACCGGGC GCCTGTCGAG CAACGACCCC AACCTGCAGA ACATTCCGGT GAAAACAGCG
GAGGGCCGCC GCGTGCGCGA AGCCTTCGTC GCGCCTGCGG GCAGTGTGAT TGCCAGCGCC
GATTATTCGC AGATCGAGCT GCGCATCATG GCGCACCTCA GCGAAGACGA AGCCCTGCTG
CGCGCTTTCA CCGAGGGGCT CGACGTGCAC CGCGCCACCG CGGCCGAAGT GTTTGGGGTG
GCGGTTGACC AGGTGAGCAG CGAACAGCGC CGCTACGCCA AGGTCATCAA CTTCGGCCTC
ATCTACGGCA TGAGCAGCTT TGGCCTGGCG CGCAACCTGG GCATCGAAAC CAAGGCGGCA
GCCGCCTACA TTGACCGCTA TTTCCAGCGC TACCCAGGTG TCAAGCACTA CATGGACGAA
ACGCGCCTTT CCGCCAAAAG CAAGGGCTAT GTGGAGACCG TGTTCGGCCG GCGCCTGTAC
CTTCCCGAAA TCAACTCACC CAACGGGCCG CGCCGGGGCG GCGCCGAGCG TGCTGCCATC
AACGCGCCCA TGCAAGGCAC GGCGGCCGAC CTGATCAAGC TCAGCATGGT CAAGGTGCAG
GAGGTGCTCG ACGCCGAGAA ACGCGCCACC AAAATGATCA TGCAGGTGCA CGATGAACTG
GTGTTTGAAG TACCCGAGGC GGAAGTCGAA TGGGTGAGGG TCGAGATCCC TCGCATCATG
GCGGGCGTGG CCGACCTCAG GGTCCCGCTG CTGGCCGAGA TCGGAGTCGG CCCGAACTGG
GACAAGGCGC ACTGA
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| Protein sequence | MSSDKKTLLL VDGSSYLYRA FHAMPDLRAN PGDPTSPATG AIRGMINMMQ KLRKDVRADY
AACVFDAKGP TFRDALYPQY KAQRSPMPDD LRSQVEPIHE VVRLLGWKVL DVPGVEADDV
IGTLACLASK QGIEVIISSG DKDLSQLVDE NITVIDTMND RRRDLAGVEA EFGVPPRLMV
DYQALVGDAV DNVPGVPKVG PKTAVKWLLE YGSLDALVAR AGEIKGVVGD NLRLSLDWLP
KGRELLTIKK DCDLIGYIDG LPALESIAIG GQQTDALKAF YEKYGFKGLV RQIDTESAPP
ELIGGPEGRH AKSPGSVGSA GSSASPGLFD EPSLPDAPLA GRASNLKYDT IFTWELLDSW
LAKIEAAELV AVDTETTSLD EMLAQIVGIS FSVTPGEAAY IPLTHDYPDA PAQLPRDEVL
ARLKPWLENP AIAKLGQHVK YDRHVFANHG IEVQGYAHDT MLQSYVLEVH KPHGLASLAE
RHVGRSGINY EDLCGKGVHQ IKFNQVDIAK AAEYSCEDSD QTLDVHRVLW PQIEANDKLR
FVYELEMKSS ETLYRIERNG VLIDAPTLAK QSGELGARIV QLEAEAHELA GQPFNLGSPK
QIGEIFFTKL GLPVVKKTPS GAPSTDEEVL EKLAEDYPLP AKILEHRGLS KLKGTYTDKL
AQLAHPRTGR VHTHYAQAVA VTGRLSSNDP NLQNIPVKTA EGRRVREAFV APAGSVIASA
DYSQIELRIM AHLSEDEALL RAFTEGLDVH RATAAEVFGV AVDQVSSEQR RYAKVINFGL
IYGMSSFGLA RNLGIETKAA AAYIDRYFQR YPGVKHYMDE TRLSAKSKGY VETVFGRRLY
LPEINSPNGP RRGGAERAAI NAPMQGTAAD LIKLSMVKVQ EVLDAEKRAT KMIMQVHDEL
VFEVPEAEVE WVRVEIPRIM AGVADLRVPL LAEIGVGPNW DKAH
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