| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1622 |
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| Symbol | |
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| ID | 4015719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1673714 |
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| End bp | 1674883 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637941294 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_548456 |
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| Protein GI | 91787504 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.810291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TTTCTACCCC TTCCCTCTTG GCCCTGTCCT GTGCCTTGCT CGCTGCCTCA
GTCGCCCAGG CGCAGAGCAG CGACACCATC AAGGTCGGCC TGATGCTGCC CTATACCGGC
ACCTTTGCCC AGCTCGGCGT GGCCATCGAA AACGGCTTCA AGCTGTTTGT GCAGGAACAG
GGTGGCGCGC TCGCCGGCAA GAAGATCGAG TTCTTCAAGG TCGACGATGA GTCCGAGCCG
TCCAAGGGCA TCGAAAACGC CAACAAGCTG GTTCAGCGCG ACAAGGTGGA TGTGTTGATT
GGCACCGTGC ACTCCGGCGT TGCCATGGGC ATGGCCAAGG TGGCGAAAGA CACCAAGACC
CTGCTCATCA TTCCGAATGC GGGGGCAGAC GTGATCACCG GGTCTTTGTG CGCACCCAAC
ATCTTTCGCA CCTCGTTCAC CAACTGGCAA CCGGCCTACG CCATGGGACT GGTGGCCGCC
GAGCGCAAAC ACAAGAGCGC CGTCACCATC ACCTGGAAGT ATGCAGCCGG CGAGGAGTCG
GTCAAGGGCT TCAAGGAGGG CTTTGAAGCC AAAGGCGGCA AGGTCACCAA GGAGCTGAGC
GTGCCTTTCC CGACGGTGGA ATTCCAGGCC TTGCTGGCCG AAATCGCCGC GGCGAAGCCC
GATGCCGTCT ACACGTTTTT TGCGGGTGCG GGTGCCGTCA AGTTTGTCAA GGACTATGCC
GCCGCCGGCC TCAAGGGCAA GATTCCTCTG TACGGCGCAG GCTTTCTGAC CGACGGCACG
CTGGAGGCGC AGGGAGACGC GGCCACGGGC CTGCTCACCA CCCTGCACTA TGCCGATGGC
CTCGACACGC CGAAAGACCG CGCCTTCCGT CTCAGCTACG CCAAGACCTA CAAGCTGCAG
CCCGATGTGT ACGCGGTCCA GGGTTACGAC GCGGCGCAAA TGCTGGCGGC CGGACTGAAA
GCCGCTGGCG GCGACTTCAG CAAGCGCGAG GTGCTCATCA AGGGCATGGA GCAGGCAAAG
ATCGACAGCC CGCGTGGCGC GTTCACCCTG TCAAAGGCGC ACAACCCGGT GCAGGACATC
TACCTGCGCA AAGTCGAGAA CAAGGAAAAC AAAATGGTCA GTGTCGCCGC CAAGGGGCTG
GCGGATCCTG CGCGCGGTTG CCGCCTGTGA
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| Protein sequence | MKKLSTPSLL ALSCALLAAS VAQAQSSDTI KVGLMLPYTG TFAQLGVAIE NGFKLFVQEQ
GGALAGKKIE FFKVDDESEP SKGIENANKL VQRDKVDVLI GTVHSGVAMG MAKVAKDTKT
LLIIPNAGAD VITGSLCAPN IFRTSFTNWQ PAYAMGLVAA ERKHKSAVTI TWKYAAGEES
VKGFKEGFEA KGGKVTKELS VPFPTVEFQA LLAEIAAAKP DAVYTFFAGA GAVKFVKDYA
AAGLKGKIPL YGAGFLTDGT LEAQGDAATG LLTTLHYADG LDTPKDRAFR LSYAKTYKLQ
PDVYAVQGYD AAQMLAAGLK AAGGDFSKRE VLIKGMEQAK IDSPRGAFTL SKAHNPVQDI
YLRKVENKEN KMVSVAAKGL ADPARGCRL
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