Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1619 |
Symbol | |
ID | 4015716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1670972 |
End bp | 1671724 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637941291 |
Product | ABC transporter related |
Protein accession | YP_548453 |
Protein GI | 91787501 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.732087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGAAC TACTGCTGTC GGCGCAGCAC CTGACCAAGC GCTTTGGCGG CCTGGCGGCG GTCAACGATG TCTCTGTCGA TCTCTGGCGC AACCACATCC ATGCGGTGAT CGGCCCCAAT GGCGCGGGCA AGTCGACGCT GACCAACCTG CTGTCGGGCG ATCTGCCGCC GACCTCGGGC ACGGTCCTGC TGGGCGAGCA CGACGTGACG GGCTGGAGCC CGGAGAAGAT TTCAAACAAG GGCCTGGGGC GCAGCTACCA GAAGACCAAC ATCTTCCTGC CCTTCACGGT CTGGGAGAAC GTGCGGCTGG CCGCGCAGTC GCGCCAGCCG CGGGCGGCAC GCTGGCTCAG CCGTGCCAGC CGTTTTGCGG CCATCAACGA GCGGGCCGAT CGGGCGCTGG CGCTGGCCGG GCTGCACAGC CGCCAGCACA GCATCGCCGG CACCATCAGC CACGGCGAGC AGCGCCAGCT GGAGATCGCG ATGACGCTGG CCACCGAGCC GCAGGTGCTG CTGCTGGACG AGCCGCTGGC CGGCATGGGC GTGGCGGAGG CCGAGCGCAT GGTGGCGCTG CTGCTGGCGC TGAAACAAGA GCACGGCATC TTGCTGGTCG AGCATGACAT GGATGCGGTG TTTGCGCTGG CCGACCAGCT GACGGTGATG GTCAACGGCC AGGTGATCGC CACTGGCACG CCGGCGCAGA TCCGGGCCGA TGCCGGGGTG CAGGCGGCCT ACCTGGGGGA GGAACACGCA TGA
|
Protein sequence | MAELLLSAQH LTKRFGGLAA VNDVSVDLWR NHIHAVIGPN GAGKSTLTNL LSGDLPPTSG TVLLGEHDVT GWSPEKISNK GLGRSYQKTN IFLPFTVWEN VRLAAQSRQP RAARWLSRAS RFAAINERAD RALALAGLHS RQHSIAGTIS HGEQRQLEIA MTLATEPQVL LLDEPLAGMG VAEAERMVAL LLALKQEHGI LLVEHDMDAV FALADQLTVM VNGQVIATGT PAQIRADAGV QAAYLGEEHA
|
| |