| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1548 |
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| Symbol | |
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| ID | 4015827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1598299 |
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| End bp | 1600365 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637941224 |
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| Product | AAA ATPase, central region |
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| Protein accession | YP_548390 |
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| Protein GI | 91787438 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000910509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.627937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCTA GATCACATTA CCTGAATCGC CTTCTGCAAA CAGTAGGATT TTGGCTGTTT
GGCGTATTGC CAGCAGCCAT TGCCGTCCTG TCCGCCATGA TGCTGTTCGG TGTCTGGACG
AGCAGCAAGG AAGCTCCGCT GAGCTTCCGA GTCCTCGGTA ACTTCACCCC CGAAGCCGGT
GTGTTGCTGT GCTTGATTGC CTACCAACTG CTGCTTCATG GGGCGCGCAT CTGGATGTGC
AAGCGCCTTG CAGATGCAAA CGGCACGATT CCCTATGAGC CAGAATTGAC CAGTGACAGC
CTTCGTGCCT TTGTGCCCGC AGTCATGACG CCTTACATCG TGTTCTTCGC CTTGTGGGGT
GCCTTTGGCA CCAAGGTTGC AGCAACCAAC TATGTGCTGG TGGCTGCATT TGGCGCCATG
ACGTTCCTGA GCTGGGTCAT CATCAAAACG GGGTGGCTCT ACGGTTTCAT CATTGGCCAG
CGCTCACGTG TGCATTACGG TGATTCCACC GAGCAAGTAC AGCGCTCGAA CGTGGCCCGC
AAGGAAGTGG CCAAGATCAC ATTCAAGGAC ATTCACGGCA ACACAGCGAT CAAGCGTCGA
CTGTTGGAGG CTGGCCGCGC CATCGTGGAT GCGCCTAAGG GTGGCCAGGG CAAGGCCCGA
AACGGTATCT TGATGGACGG TGAACCCGGC AATGGCAAAA CGGTCTTTGC CGAAGCGCTT
GCCGGTGAGC TCAAGCTCCC ATTGCTGACA CTCACCCACT CGGATGTGGC CAGTCGCTGG
GTAGGAGAAC GCACCGAAAA AGTGAAGGCC GCTTTTGAGC AGGCGATTCG ATCACAGCCC
TGCGTCTTCT TCATTGACGA AATCGACAGC TTCTTGCCTG ATCGGTCAAC GGATAGCGCC
CAGACCAAGG AAGACAGCGA TATCACCAAT TCCCTTCTGA CGCTGCTGAT CGAAATTCGC
AAGCATCGTG TGGTGGTCGT GGCTGCAACG AACTACGTGG ATCGCCTTGA CGGTGCCGCC
ATTCGTGAAG GCCGGTTTGA CTTCAAGGTC GAAATCACCC CGCCGGATGA AGCAGCGCGT
ATTGGCCTGC TGACCGCCGG TTTAAGCACC AACGCACCCA CTTTGCGTGT GAGCCAGGCG
ACTATCAAAA GCGTCGCTCA ACGTTGGAAT GGCTTTTCCG TGAAGCGAAT CCTTGCCGTG
ACTGAGGAAA TGCCTTCCTA CGTGGCAGAA GCACGTGAGC AAGGTACTTT CAAGGGTGAG
CTGGAGTTTG ACGACTTCAT GGCCGCATTG CGCCGGCTGC AGGGCCGTAA GGGTGCCATG
CCTGAGAACG TCAAGGCCAT GGCTGACCTG GTGCTGCCGG AGGTGACGCG GGAAGCCCTC
ACGATGCTTG CAAGCCGCCT GAAAGACCCA CAGCGCATTG AGCGCCTCGG TGGCACATTG
CCCTCTGGCG TCCTGTTCTT CGGCCCACCT GGCACGGGTA AGACCGCCGC TTGCAAGGCT
CTGGCGAAGG ACGTCCAGTG GGCTTTCCTG ATCAAGACCG GCCCCGACCT GGTGCGTGAC
CCCAAGGCCC TGGACAAGCT CTACGCGCAG GCCAAGGATT TGCGTCCGTG CATCATCTTT
GTGGACGAGG CAGATGATTT GCTGCTTTCC CGTGAAGCAC CACGAAATAC GGAAGCCACC
AATAAACTTT TGACCATCAT GGATGGCGTG AATGACCGTG TGCGTGACGT GGTGTGGGTG
GCTGCTACCA ACAATCCAGA GCGGATTGAT TCCGCTCTGC TGCGTGGTGG TCGGTTCACA
GAGAAGGTTG AATTTGTTCG TCCAGACGAA GACCAGTTGA CCACGCATAT CGGACAGTGG
TTCACAAACC GCAGGATTGG TTTGAAGTCT GGTTTGGATT CCTCGACTAT TGCATCCATG
TTGGGTGACG AAAGCATTGC CAACGCTGAG GCTGTGTTGC AGTACGCAGT CAACCGTGCA
ATCTCTCAGT CGAACGATGA TTTCATTGAA GTTGGTGTTG CCGATGTGCA GAGAGGTGTG
GCGATGGTTT TGGGGACTGC GTGCTGA
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| Protein sequence | MEARSHYLNR LLQTVGFWLF GVLPAAIAVL SAMMLFGVWT SSKEAPLSFR VLGNFTPEAG
VLLCLIAYQL LLHGARIWMC KRLADANGTI PYEPELTSDS LRAFVPAVMT PYIVFFALWG
AFGTKVAATN YVLVAAFGAM TFLSWVIIKT GWLYGFIIGQ RSRVHYGDST EQVQRSNVAR
KEVAKITFKD IHGNTAIKRR LLEAGRAIVD APKGGQGKAR NGILMDGEPG NGKTVFAEAL
AGELKLPLLT LTHSDVASRW VGERTEKVKA AFEQAIRSQP CVFFIDEIDS FLPDRSTDSA
QTKEDSDITN SLLTLLIEIR KHRVVVVAAT NYVDRLDGAA IREGRFDFKV EITPPDEAAR
IGLLTAGLST NAPTLRVSQA TIKSVAQRWN GFSVKRILAV TEEMPSYVAE AREQGTFKGE
LEFDDFMAAL RRLQGRKGAM PENVKAMADL VLPEVTREAL TMLASRLKDP QRIERLGGTL
PSGVLFFGPP GTGKTAACKA LAKDVQWAFL IKTGPDLVRD PKALDKLYAQ AKDLRPCIIF
VDEADDLLLS REAPRNTEAT NKLLTIMDGV NDRVRDVVWV AATNNPERID SALLRGGRFT
EKVEFVRPDE DQLTTHIGQW FTNRRIGLKS GLDSSTIASM LGDESIANAE AVLQYAVNRA
ISQSNDDFIE VGVADVQRGV AMVLGTAC
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