| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1393 |
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| Symbol | |
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| ID | 4011907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1429913 |
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| End bp | 1431199 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637941073 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_548240 |
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| Protein GI | 91787288 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.656328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.386042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGTC GTTTTACCCT CAAGGCGCTT ACCGCTGCCG TCGCGCTGAC GGGCCTTTCT
GCCCTGTCAG CCCATGCCCA GACCACGGGC ACGATCAAGG TTGGCATTCT GCACAGCCTG
TCGGGCACCA TGGCCATTTC CGAGACTGTG TTGAAAGACA CCGTGCTGAT GGCGATTGAC
GAGATCAATG CCAAAGGCGG CGTGATGGGC AAGAAGCTTG AGCCCGTGAT TGTGGATCCG
GCTTCCAACT GGCCGCTGTT TGCCGAAAAA ACCAAGCAGC TGCTGGGCCA GGACAAGGTT
TCGGTGATCT TCGGCTGCTG GACGTCGGTG TCCCGCAAGT CGGTGCTGCC AGTCGTTGAG
GAAATGAACG GCCTGCTGTT CTACCCCGTG CAGTACGAGG GCGAAGAACT CTCCAAGAAC
GTGTTCTACA CGGGTGCGGC ACCTAACCAG CAGGCTATTC CTGCTGTGGA CTACCTGATG
AGCAAGGCCG GTGGCGGCGC CAAGCGCTGG GTGCTGCTGG GTACCGACTA TGTGTACCCA
CGCACCACCA ACAAGATTTT GCGCGCCTAC CTGAAGAGCA AGGGCGTGAA AGACACCGAC
ATCGACGAGA AGTACACCCC GTTTGGCCAT TCCGACTACC AGACCATCGT GGCTGACGTG
AAGAAATTCT CTGCCGGCGG CAAGACGGCT GTGGTGTCCA CCATCAACGG TGACTCCAAC
GTGCCTTTCT ACAAGGAACT GGGCAATGCC GGCCTGAAGG CCAAGGACGT GCCTGTGGTC
GCTTTCTCGG TGGGTGAAGA AGAACTGCGC GGCGTGGACA CGAAGCCGCT GGTCGGCCAC
CTGGCTGCCT GGAACTACTT CCAGTCGATC AAGAGCCCGG CCAACACCGA GTTCATCAAG
AAGTGGTCTG ACTACGCCAA GGCCAAGGGC ATTGCTGGCC ACAAAGACAA GCCTTTGACC
AACGACCCGA TGGAAGCCAC CTACATCGGC ATCAACATGT GGAAGCAGGC CGTCGAGAAG
GCCAAGTCCA CCGACACCGA CAAGGTCATT GCCGCCATGG CTGGCCAGAC CTTCAAGGCG
CCGTCGGGCA TCGTGTCGAA GATGGATGAG AAAAACCATC ACCTGCACAA GTCCGTCTTC
ATCGGCGAGA TCAAGGCCGA CGGCCAGTTC AATGTGGTGT GGAAGACGCC TGGCCCGGTG
AAGGCCAAGC CATGGAGCCC GTACATCGAA GGCAACGACA AGAAGCCAGA CGAGCCGGCG
AAAAGCGCGA CAGTAGCAAC CAAATAA
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| Protein sequence | MQRRFTLKAL TAAVALTGLS ALSAHAQTTG TIKVGILHSL SGTMAISETV LKDTVLMAID
EINAKGGVMG KKLEPVIVDP ASNWPLFAEK TKQLLGQDKV SVIFGCWTSV SRKSVLPVVE
EMNGLLFYPV QYEGEELSKN VFYTGAAPNQ QAIPAVDYLM SKAGGGAKRW VLLGTDYVYP
RTTNKILRAY LKSKGVKDTD IDEKYTPFGH SDYQTIVADV KKFSAGGKTA VVSTINGDSN
VPFYKELGNA GLKAKDVPVV AFSVGEEELR GVDTKPLVGH LAAWNYFQSI KSPANTEFIK
KWSDYAKAKG IAGHKDKPLT NDPMEATYIG INMWKQAVEK AKSTDTDKVI AAMAGQTFKA
PSGIVSKMDE KNHHLHKSVF IGEIKADGQF NVVWKTPGPV KAKPWSPYIE GNDKKPDEPA
KSATVATK
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