Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1330 |
Symbol | |
ID | 4011976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1369461 |
End bp | 1370885 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637941009 |
Product | type II secretion system protein E |
Protein accession | YP_548178 |
Protein GI | 91787226 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTACC CATTGCCTTA CGCCTTTGCC CGCAGCAATA CCCTGCTGCT GGAAGACGAT GGCCATGCGC TGACGCTGTG GCATCCGGCC CGGCCCGACC CTGCGGCCCT GGGTGAAGTG ATGCGCAAGT TCGCGGCGCA CAGCCCCGCG CTGGTCCTTC AGTGCGCCGA CGCGGGAACC TTGACCCAGC GCATCAGCGC CGCCTACGCG GCAGGGGAGT CGAGTGCGGC CGCCGTGGTG AGCGAGGTGG AGTCCGACGC CGACCTGTCG CGCATCATGC AGGAGTTGCC GGCGGTCGAG GATCTGCTGG AAACCTCCGA TGACGCGCCC ATCATCCGCA TGCTCAATGC GCTGTTGACA CAGGCCGCGC GCGACGGCGC GAGCGACATC CACATCGAGC CTTACGAGCG GCATTCGAGC GTGCGTTTTC GCGTGGACGG CACCCTGCGC GAAGTCGTGC AGCCCAACCG GGCGCTGCAC GCCGCGCTGA TCTCGCGCCT GAAGATCATG GCGGACCTGG ATATTTCGGA AAAACGCCTT CCGCAGGATG GCCGCATCAG CCTGCGCATT GGCACGCGAG CGGTGGACGT GCGTGTGAGC ACCTTGCCCA GCGCCCACGG TGAGCGCGCC GTGTTGCGCC TGCTGGACAA GAGCGAGAGC AAGCTGAGCC TGGAGTCGGT CGGCATGCAG GGTGATGTGC TTCACCGTTT CGAACACCTG ATCGCCCAGC CGCACGGCAT CATCCTGGTC ACCGGCCCCA CGGGTTCGGG TAAAACCACC ACCCTTTATG CTGCCTTGCA GCGGCTCGAT GCCAGCGCCA GCAACATCAT GACGGTCGAA GATCCCATCG AGTACGAGCT TGCGGGCATC GGGCAGACGC AGGTCAATTC AAAGATAGAC CTGAGCTTTG CCAAGGCGCT GCGCGCCATC CTGCGCCAGG ACCCGGACGT GATCATGATC GGTGAGATCC GGGATTTTGA GACCGCGCAG ATCGCCATAC AGGCCTCGCT GACCGGCCAC CTGGTGCTCG CCACGCTGCA CACCAATGAT GCGTCCAGTG CCGTGACGCG CCTGACCGAT ATCGGTGTGG AGCCCTTTTT GCTGAGTTCG TCCCTGCTCG GCGTGCTGGC ACAGCGGCTG GTGCGCAAGC GGTGCACCTA CTGCCATGCT TCTTCGGCAG GTCCGGGCCT GGCCGCCGGC TGCGAGCATT GCGGCTATAC CGGTTACGCG GGCCGTACGG GCGTCTTTGA GTTGCTGGTG ACCGATGACG CTGTTCGCGC CCAGATTCAC AACCGCGCGT CTGAGGCAGA AATTCGCGCA GCCGCGCTGC AGGCGGGCAT GATGCTGATG CGCGACGACG GTGAGCGGCT GGTCACCGCC GGCGTCACCT CGCGCGAGGA GTTGCTGCGC GTGACCCCCG ACTGA
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Protein sequence | MRYPLPYAFA RSNTLLLEDD GHALTLWHPA RPDPAALGEV MRKFAAHSPA LVLQCADAGT LTQRISAAYA AGESSAAAVV SEVESDADLS RIMQELPAVE DLLETSDDAP IIRMLNALLT QAARDGASDI HIEPYERHSS VRFRVDGTLR EVVQPNRALH AALISRLKIM ADLDISEKRL PQDGRISLRI GTRAVDVRVS TLPSAHGERA VLRLLDKSES KLSLESVGMQ GDVLHRFEHL IAQPHGIILV TGPTGSGKTT TLYAALQRLD ASASNIMTVE DPIEYELAGI GQTQVNSKID LSFAKALRAI LRQDPDVIMI GEIRDFETAQ IAIQASLTGH LVLATLHTND ASSAVTRLTD IGVEPFLLSS SLLGVLAQRL VRKRCTYCHA SSAGPGLAAG CEHCGYTGYA GRTGVFELLV TDDAVRAQIH NRASEAEIRA AALQAGMMLM RDDGERLVTA GVTSREELLR VTPD
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