| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1290 |
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| Symbol | |
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| ID | 4012183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1331688 |
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| End bp | 1332683 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637940967 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_548138 |
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| Protein GI | 91787186 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.877345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAGA TCGGATTCAT GCTGCTTACC TGGGCGCTGG CCTTTGCCGC TCAGACGGCC
ATCGCCAAAA CCACCTTCAA TCTCTCCACG CCCGACCCGG ATAGTTCTGA AATTACCCTG
GCAGCCAAAA AATTCGCGGA AATTGTCGCG GCCAAAAGTG GCGGGCAAAT CGAAGTCAAG
GTGTTTCCGA ACGGGCAGCT TTACGGGGGT GATCCTTCCG CTGCCGTGCG CCAACTGGCG
AGCGGGTCCT TAGATATGCT GCTGCTGTCA AGCTCGCTGT ATGCCAACTT CAATCCGAAG
TTCACCGCCA TCTCCGTCCC GTACCTGTTT GATGACAATG CCCAGCTTCG TGCTTATCTG
GCAGGCCCCC TGGGGCAGGA GTTGCTCACT GACCTGAACG GCATAGGCAT CAAGGGGTTG
GCGCTCTGGC AGCGTCCGTT CCGTCAGATG ACCAATTCGC GCCGGGCGAT CAACCAGCCG
CAGGATCTGG CCGGGATGAA GTTCCGTGTC CCGAATAACC CCCTGTGGAT GGAGTTTTTT
GGCAAGCTCG GCGCCGTTCC GACCCCCATG GCATTCGGCG AGGTCTACAA CGCCCTGCAG
CTGAAGGTGG TCGATGGCCA GGAAAACCCG ATCAACATTC CGGTAACCGC CAAGTTTTAC
GAAGTCCAGA AGTTCGCCAC GCTGACCAAC CACATGGCCG ACGGTTGGGT GCTGGCCATC
AATCCCGCCA AATTCGCGGC GCTCCCGGAG GCGGAGAAGC AGGCGCTGCA AGCTGCCAGC
GTAGAGGCGG AAGCATGGAA GTCTGCCAAT GACGCAGCCG ATGCCAGCCG ATCGGTGGAA
TTCCTGCGCT CCAAGGGCGT GCAGGTCAAT AGCCTGAGCC CGGAGCAACA AAAAGCCTTT
GTGGCGGTCT CCAAAGAACT GTTCCCCCGC TTCTCAACGC TTGTCAAGGA TCAGGCCTTC
TTTGACAAGA CCTTGTCCTT TGTCGGCAAA AAGTGA
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| Protein sequence | MSKIGFMLLT WALAFAAQTA IAKTTFNLST PDPDSSEITL AAKKFAEIVA AKSGGQIEVK
VFPNGQLYGG DPSAAVRQLA SGSLDMLLLS SSLYANFNPK FTAISVPYLF DDNAQLRAYL
AGPLGQELLT DLNGIGIKGL ALWQRPFRQM TNSRRAINQP QDLAGMKFRV PNNPLWMEFF
GKLGAVPTPM AFGEVYNALQ LKVVDGQENP INIPVTAKFY EVQKFATLTN HMADGWVLAI
NPAKFAALPE AEKQALQAAS VEAEAWKSAN DAADASRSVE FLRSKGVQVN SLSPEQQKAF
VAVSKELFPR FSTLVKDQAF FDKTLSFVGK K
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