Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1223 |
Symbol | |
ID | 4011808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1270934 |
End bp | 1271599 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637940901 |
Product | cytochrome c, class I |
Protein accession | YP_548072 |
Protein GI | 91787120 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.153054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.842605 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGC TGTTGACCAC GATATTCGCT GTAGCTGTCT CCTGTGTGAC GGTCTCAAGC CTGGCCCAGG AAGTTAAGGG CGATGCCAAA GCCGGCGAAA CCAAGAACGC CATGTGCATT GGCTGTCACG GCATCAAGGG CTACCAGGCC TCGTTCCCCG AGATTTACAA GGTGCCGATG ATTTCCGGCC AGGGGGGCAA ATACATCGTG GCCGCGCTCA ATGCCTACAA AAAAGGTGAG CGCAAGCATC CGACCATGCG CAGCATTGCC GAGTCGCTGA ACGACCAGGA CATCGCCGAC CTGGCTGCTT ATTACAGTAC GCATGGTGCG GCAGCAGGTG CCGAGCTTCC TGCCAAGCCA GCCAAAGAAC CCAGCGCTGA TGTGCAGGCC CTGCTGAACA AGGCCAATTG CGCTTCATGC CACGGCGCCA ATTTCAGCAA ACCGGTCGAT CCGGCCTATC CCAAGATTGC CGGCCAGCAC AGTGATTACC TGTTCGTGGC GCTCAAGGCC TACAAGACCG ACAACAACCC CAAGGTGGGT CGCGGCAACG CCATCATGGC GGGCATGGCC AAGCAGTACA CCAATGCCGA GCTGAAGCTG CTGGCGAACT ACCTGGCTTC GGTGGACGGT GAACTCAAGG TGATTCCCCA GAGCAAGTTC CGCTGA
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Protein sequence | MNKLLTTIFA VAVSCVTVSS LAQEVKGDAK AGETKNAMCI GCHGIKGYQA SFPEIYKVPM ISGQGGKYIV AALNAYKKGE RKHPTMRSIA ESLNDQDIAD LAAYYSTHGA AAGAELPAKP AKEPSADVQA LLNKANCASC HGANFSKPVD PAYPKIAGQH SDYLFVALKA YKTDNNPKVG RGNAIMAGMA KQYTNAELKL LANYLASVDG ELKVIPQSKF R
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