Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1165 |
Symbol | |
ID | 4011999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1208040 |
End bp | 1208750 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637940842 |
Product | histidine utilization repressor |
Protein accession | YP_548014 |
Protein GI | 91787062 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCA CTCCGCTGCC TGCTTATGGG CAGGTCAAGG CATTCATCAA AACGCGCATC AGTGCCGGCA CCTGGAGGCC CGGTGATCCG GTGCCCAGCG AGGCCGTGCT GATGGCGCAA TTTGGCGTCA GCCGCATGAC GGTCAACCGT GCGCTGCGCG AGCTGATGGG CGAGGGCCTG GTCACGCGAA TCCAGGGCTC GGGAACCTTT GTGGCTGAGC TGCACCGCAT TTCTTCCACG CTGACCATTC GTGATATTCA TGAGGAAGTC ATTGAGCGGG GCCACACCCA TAGCTCGCGG GTGTTGCGGG CGGAGTCCGA AAAAGCCAGC GCCGACGTGG CGCGCACCCT GGGCCTGCGC ACGGGCGGGC GTGTGTTCCA CACCATATTG ATTCATCTGG AAAACGGTGT GCCCATCCAG TACGAAGACC GCTATGTCAA CCCGGCGGCG GCACCCAACT ACCTGAAGAC CGACTTCACG CAGACCACGC CCACCTACCA CCTGCTGGAA GAAGCGCCGC TCACCGAAGC CAGCTATTCG ATCGAGGCCT GCCTGCCGAC AGCACTGGAG GCCAGGCACC TCGATATCAA GCCAGGCGAA GCCTGTCTGG CGATGATGCG CCGCACCGTG AGCGGCGCCC ACATTGCCAG CGTGGCACGG CTGGTGTACC CCGGTTCGCG CTACAGCTTT GCCGGAAAGT TCCAGGCATG A
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Protein sequence | MATTPLPAYG QVKAFIKTRI SAGTWRPGDP VPSEAVLMAQ FGVSRMTVNR ALRELMGEGL VTRIQGSGTF VAELHRISST LTIRDIHEEV IERGHTHSSR VLRAESEKAS ADVARTLGLR TGGRVFHTIL IHLENGVPIQ YEDRYVNPAA APNYLKTDFT QTTPTYHLLE EAPLTEASYS IEACLPTALE ARHLDIKPGE ACLAMMRRTV SGAHIASVAR LVYPGSRYSF AGKFQA
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