| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1162 |
|---|
| Symbol | |
|---|
| ID | 4011996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 1204212 |
|---|
| End bp | 1205048 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637940839 |
|---|
| Product | ABC-type phosphate/phosphonate transport system periplasmic component-like |
|---|
| Protein accession | YP_548011 |
|---|
| Protein GI | 91787059 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.304187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA TCAGCACATC ACCCGTCGCC TCCCTGCCGG TGGCCAACGC CCGCATGTAC
TCGGCGACCC CATCGGTCAA GGCCGACTGG AAGCAGCTGC TGGACTGGGT GCTGGCCCGC
GCCGGTCTGC CGTGGGACGT GATCGACTAC GACGCGCCGG CGCCCCTGTC GGCGCTGTGG
GCGCGCGATG ACCTGGGCCT GGCCATGATG TGCGGCCTGC CCTTTGCGCA ACGCGCAGTC
CGGCCCATCC TGGTCGCGGC ACCGCTGCCG TCACCGGCCC GTTACGGCGG CCGGCCGGTG
TATTTCACCG ACATCGTGGT GCGCACCGGC GCGCCTTACC GGACGCTCGA AGACACCTTC
GGCGGCGTGG TGGGCTACAC GCTGGCCGAT TCGATGTCGG GCGGCGTGGC CCCGCGCCAC
TACCTGGAGC GCTACCGCAC GGCCGGCCGG CCGCGGCTTT ACCGCCAGGC GGTTGGCGAG
CTGATTCACG CCCGCGGCGT GATCGAGGCG CTGGCCGAAG GCCGCATCGA TGTGGGCCCG
CTGGACAGCT ACTACCACGA TCTGCTGCGG CAGCGGGAGC CGGACTTTGC CGCCCAGGTG
CGCACGGTGG CGAGCACCCC GGCACTGCCG ATTCCTCCGC TGGTCGCAAC CGCGGCCCTG
ACCGCAGGCG AACTCGCGCG GCTGCGCGCG GCCCTGCTGG CAACAGCCAC GGCGCCGGAA
CTGGCACCGC TCATGCAGGG CCTGCTGCTG GCGGGCTTTG CGGTGCCCGA CCCCGCCGAT
TACCAGCCCC TGGCAGTCAT GGCCGCTGCG GCCGCCATCC CTTTCGAGGA GCTCTGA
|
|---|
| Protein sequence | MNAISTSPVA SLPVANARMY SATPSVKADW KQLLDWVLAR AGLPWDVIDY DAPAPLSALW
ARDDLGLAMM CGLPFAQRAV RPILVAAPLP SPARYGGRPV YFTDIVVRTG APYRTLEDTF
GGVVGYTLAD SMSGGVAPRH YLERYRTAGR PRLYRQAVGE LIHARGVIEA LAEGRIDVGP
LDSYYHDLLR QREPDFAAQV RTVASTPALP IPPLVATAAL TAGELARLRA ALLATATAPE
LAPLMQGLLL AGFAVPDPAD YQPLAVMAAA AAIPFEEL
|
|---|
| |