| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1132 |
|---|
| Symbol | purH |
|---|
| ID | 4011831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1169744 |
|---|
| End bp | 1171327 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637940810 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_547982 |
|---|
| Protein GI | 91787030 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0402976 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.247958 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAT TGATTTCCGT CTCCGACAAG ACCGGTATCC TCGAATTTGC CCAGGCGCTG
CATGCGTTGG GCATCAAGCT GATTTCCACC GGCGGCACGG CCAAGTTGCT GGCCGAGGCC
GGCCTGCCGG TGACCGAGGT GGCGGAGCTC ACGGGCTTTC CGGAAATGCT CGACGGTCGC
GTCAAGACGC TGCACCCCAA GGTGCATGGC GGACTGCTGG CGCGGCGTGA TGTGCCCGAG
CATATGGCCG CCCTGAAAGC GCACCAGATA GACACGATTG ACCTGCTGGT CGTCAACCTC
TATCCGTTTG AGGCGACGGT GGCCAAGGCC GGCTGCACGC TGGAAGACGC GATCGAAAAC
ATCGACATCG GTGGCCCGGC CATGGTGCGC TCGGCCGCCA AAAACTGGAA GGACGTGGGC
GTGTTGACCG ATGCCTCGCA GTACGCCGGG GTGCTGGACG AACTCAAGGC CGGCGGCAAG
CTGACGGACC AGACCAAATT CGCCCTGTCG GTGGCGGCAT TCAACCGCAT CAGCCAGTAC
GACGGTGCCA TCAGCGACTA TCTCTCGGGC ATTCAGGCTG ATGGCACGCA CAGCCTGTTT
CCGGGCCAGG CCAATGGCCG TTTCATCAAG GTGCAGGATT TGCGTTATGG CGAAAATTCG
CACCAGCAGG CCGCGCTGTA CCGGGATTTG TACCCCGCGC CGGGTTCGCT CGTGACCGCC
AAACAGCTGC AGGGCAAGGA ACTCTCCTAC AACAACATTG CCGATGCCGA CGCCGCCTGG
GAATGCGTCA AGAGCTTTGA TTTCCTCAAG GATGGTGCCG CCTGCGTGAT CGTCAAGCAT
GCCAACCCCT GCGGTGTGGC CGTGGGCAAG GATGGGCTGG AGGCCTACAG CAAGGCCTTC
AAGACCGATC CCACATCCGC GTTCGGCGGC ATCATCGCGT TGAACTGTCC TCTCGACGAG
CACGCCGCGC TGCAAATTTC GAAGCAGTTC GTTGAAGTGC TGATGGCGCC GGCCTTTTCG
CCCGAAGCGC TGGAAGTGTT CAAGGCCAAG GTCAACGTGC GGATTCTGCA AATTGACCTG
CCGCCCGGCG GCGATACGGC GTGGAAGCAG GGCCGCAATT TGATCGACGT CAAGCGTGTG
GGTTCGGGCC TTCTGATGCA GACCGCGGAT AACCACGAGC TGGCCATCGG CGAGCTGAAG
GTCGTCAGCA AGCTGCAACC GACGCAGGAG CAGCTGCACG ACATGCTGTT TGCCTGGAAG
GTCGCGAAAT ACGTGAAATC CAATGCCATC GTGTTTTGCT CGGGCGGCAT GACGCTGGGT
GTGGGTGCGG GCCAGATGAG CCGCATCGAC TCGGCACGCA TCGCCTCGAT CAAAGCTGCA
AATGCCGGCC TGACGCTGCA GGGATCGGCC GTTGCCAGCG ACGCGTTCTT TCCGTTCCGC
GACGGGCTTG ACGTGGTGGT GGACGCGGGA GCGACCTGCG TCATCCAGCC AGGTGGCAGC
ATGCGCGATG ACGAGGTGAT CGCCGCGGCC AACGACCGCG AGGTGGTGAT GGTGCTGACC
GGCGTGCGGC ACTTCAGGCA CTGA
|
|---|
| Protein sequence | MNALISVSDK TGILEFAQAL HALGIKLIST GGTAKLLAEA GLPVTEVAEL TGFPEMLDGR
VKTLHPKVHG GLLARRDVPE HMAALKAHQI DTIDLLVVNL YPFEATVAKA GCTLEDAIEN
IDIGGPAMVR SAAKNWKDVG VLTDASQYAG VLDELKAGGK LTDQTKFALS VAAFNRISQY
DGAISDYLSG IQADGTHSLF PGQANGRFIK VQDLRYGENS HQQAALYRDL YPAPGSLVTA
KQLQGKELSY NNIADADAAW ECVKSFDFLK DGAACVIVKH ANPCGVAVGK DGLEAYSKAF
KTDPTSAFGG IIALNCPLDE HAALQISKQF VEVLMAPAFS PEALEVFKAK VNVRILQIDL
PPGGDTAWKQ GRNLIDVKRV GSGLLMQTAD NHELAIGELK VVSKLQPTQE QLHDMLFAWK
VAKYVKSNAI VFCSGGMTLG VGAGQMSRID SARIASIKAA NAGLTLQGSA VASDAFFPFR
DGLDVVVDAG ATCVIQPGGS MRDDEVIAAA NDREVVMVLT GVRHFRH
|
|---|
| |