| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1107 |
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| Symbol | |
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| ID | 4011941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1140108 |
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| End bp | 1143017 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637940784 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_547957 |
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| Protein GI | 91787005 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000104617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAG CACAACACAC AGTGCCCGTC ACATCGGGCG GCCTGGCCGG CAATCCGGTC
AGCAACGACA GCAGCGCGCC AACCAACCCG CTCGCCCACT ACCAGATCAT TCGCCGCAAT
GGTTCCGTGG TTCCGTTCGA GCCCAACAAG ATTGCCGTGG CCATGATGAA GGCCTTCCTG
GCCGTGCATG GCACGCAGGG AGCCGCTTCG GCCAGTGTCC GCGAAACCGT CGACGGCCTG
ACCCAGGCCG TCATCCGGGC CCTGATGCGC TCCCGCCCGG GCGGCGGAAC CTTTCATATT
GAGGATGTAC AGGACCAGGT CGAGTTGGGC CTGATGCGCG GAGGCCACCA TGAAATCGCC
CGCGCCTACG TGTTGTACCG CGAAAAGCGC AGCCAGGAAC GCGCCCGCCA GCCGCAGACC
CCGGCGCCCG AAGCCCCCAT GCTGCATGTG ACGGACGGGG GCCAACGGGT CGCACTGGAC
GTGCGCAATC TGCAGGCCCT GATTGAAGCG TCCTGCGCCA ACCTGGGCGC CGATGTCAAA
CCCGACCCGA TTGTTGCCGA GACCATGCGC AACCTCTACG ACGGCGTGCC CATCGACGAG
GTCTACAAGG CGTCCATCCT CGCGGCCCGC ACCCTGATCG AAAAAGACCC TGACTACACC
TACGCCACCG CACGCCTGCT GATGCACACC ATCCGCCGGG AAGTCCTGGG CGAAGAAGTC
AGCCAGGAAG AAATGCACTC CCGCTATGCA GAGTATTTTC CGAAGTTCAT CGCCAAAGGT
GTGCAGAACG AACTGCTCGA CGAAAAGCTG CAGCAGTTTG ACCTGGCCCG GCTGGGCGCG
GCGCTCAAGC CGGAGCGCGA CCTGAAGTTT GACTACCTCG GCCTGCAGAC CCTGTTTGAC
CGCTATTTCC TGCATGTGCG CAAACAGCGC ATCGAACTGC CGCAGGCGTT CTTCATGCGC
GTGGCCATGG GCCTGTCGCT GGGCGAAATC GACCGTGAAG CGCGCGCCAT CGAGTTTTAC
GAAATCCTCT CGTCGTTCGA CTTCATGTCG AGCACGCCCA CCCTGTTCAA TGCCGGCACC
CTGCGTTCGC AGCTGTCGTC CTGCTACCTC ACCACGGTAG CCGATGATCT GGGCGGCATT
TACGACGCCA TCAAGGAAAA CGCCCTGCTC TCCAAGTTTG CCGGCGGGCT GGGCAACGAC
TGGACACCTG TGCGCGCCCT GGGTGCCCAC ATCAAGGGCA CCAACGGCGA GTCCCAGGGC
GTCGTTCCCT TCCTGAAAGT CGTCAACGAC ACGGCCGTCG CGGTCAACCA GGGTGGCAAG
CGCAAGGGCG CGGTCTGCGC CTACCTGGAA ACCTGGCACC TGGATATTGA AGAGTTCCTG
GAACTGCGCA AAAACACCGG CGACGACCGC CGGCGCACGC ACGACATGAA CACAGCCAAC
TGGATCCCTG ACCTCTTCAT GCGCCGCGTG ATGGAAAAAG GCACCTGGAC GCTGTTCTCG
CCATCGGACA CACCCGACCT GCACGACAAG TTCGGCAAGG AGTTCGAAAA GATCTACACC
GCCTATGAAG CCAGGGCCGA GCGTGGCGAG ATCAAGCCTG CCCGCAAGCT GCAGGCCACC
GACATGTGGC GCAAGATGCT GTCGATGCTG TTCGAGACCG GCCATCCCTG GATCACCTTC
AAGGATGCCT GCAATGTGCG CTCCCCGCAG CAGCACGCCG GCGTGGTGCA CTCCTCCAAC
CTGTGCACCG AGATCACGCT CAATACCAGC GACACCGAAA CCGCCGTCTG CAACCTCGGC
TCCGTCAATC TGGTCCAGCA CCTGAAGGAC GGCGCGATTG ACCATGACAA GCTGAAGAAG
ACCATCACCA CGGCCATGCG CATGCTGGAC AACGTGATCG ACATCAACTA CTACGCGGTC
AAGAAAGCAC GCGACTCCAA CATGCGCCAC CGCCCTGTGG GCCTGGGGAT CATGGGCTTC
CAGGACTGCC TGTATGAACT GCGCGTGCCC TACGCCTCCC AAGAAGCGGT CGAGTTTGCC
GACAAGTCCA TGGAGGCGGT CTGCTACCAC GCCTACTGGG CTTCGACCGA GCTCGCCAAG
GAGCGCGGCA AATACGCCAG CTACAAGGGA TCGCTTTGGG ACAAAGGCAT CCTGCCGCTC
GACACGCTGG ACATGCTGGC CGAAGAGCGC GGCGGTTATG TGGAAGTCGA CCGTTCCGCC
ACCCTGGACT GGGATGCCCT GCGCCAAAAG ATTGCCCAGG ACGGCATGCG CAACTCCAAC
TGCGTCGCCA TTGCCCCGAC GGCCACCATC TCCAACATCA TCGGGGTGGA CGCCTGCATC
GAACCCTGCT TCGGCAACCT CTCGGTCAAG TCCAACCTGT CCGGCGAGTT CACCGTCATC
AACCACTACC TGGTGCGTGA TCTGAAGCGG CTCGGCCTGT GGGACGACGT GATGGTTGTC
GATCTCAAGC ACTTCGATGG CTCGCTTCGC CCGGTTGACC GGGTGCCGCA GGAAATCAAG
GCGCTTTACG CCACGGCATT TGAAGTGGAA ACGTCATGGA TTGTTGAAGC CGCTGCCCGC
CGCCAGAAAT GGATTGACCA GGCGCAGTCT CTCAACATCT ACATGGCCGG CGCCTCTGGC
AAAAAGCTCG ATGACACCTA CAAGCTGGCC TGGTTGCGTG GATTGAAAAC CACTTACTAC
CTGCGCACCA TGGGTGCCAC ACACGCCGAG AAATCGACGG TCAAGGCGGG CAAGATGAAC
TCGGTGTCCT CGGGCCCCGA AGCATCGGGC AGCGGCAAGA GCGCGCTTGA AGTGGCAGCT
GCGGCAGCGC AAGCACAGAT GAATGCATCG CCGGCAACCG ACATCAAGTT CTGCGCGATC
GACGATCCCG GTTGCGAGGC GTGCCAATAA
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| Protein sequence | MQTAQHTVPV TSGGLAGNPV SNDSSAPTNP LAHYQIIRRN GSVVPFEPNK IAVAMMKAFL
AVHGTQGAAS ASVRETVDGL TQAVIRALMR SRPGGGTFHI EDVQDQVELG LMRGGHHEIA
RAYVLYREKR SQERARQPQT PAPEAPMLHV TDGGQRVALD VRNLQALIEA SCANLGADVK
PDPIVAETMR NLYDGVPIDE VYKASILAAR TLIEKDPDYT YATARLLMHT IRREVLGEEV
SQEEMHSRYA EYFPKFIAKG VQNELLDEKL QQFDLARLGA ALKPERDLKF DYLGLQTLFD
RYFLHVRKQR IELPQAFFMR VAMGLSLGEI DREARAIEFY EILSSFDFMS STPTLFNAGT
LRSQLSSCYL TTVADDLGGI YDAIKENALL SKFAGGLGND WTPVRALGAH IKGTNGESQG
VVPFLKVVND TAVAVNQGGK RKGAVCAYLE TWHLDIEEFL ELRKNTGDDR RRTHDMNTAN
WIPDLFMRRV MEKGTWTLFS PSDTPDLHDK FGKEFEKIYT AYEARAERGE IKPARKLQAT
DMWRKMLSML FETGHPWITF KDACNVRSPQ QHAGVVHSSN LCTEITLNTS DTETAVCNLG
SVNLVQHLKD GAIDHDKLKK TITTAMRMLD NVIDINYYAV KKARDSNMRH RPVGLGIMGF
QDCLYELRVP YASQEAVEFA DKSMEAVCYH AYWASTELAK ERGKYASYKG SLWDKGILPL
DTLDMLAEER GGYVEVDRSA TLDWDALRQK IAQDGMRNSN CVAIAPTATI SNIIGVDACI
EPCFGNLSVK SNLSGEFTVI NHYLVRDLKR LGLWDDVMVV DLKHFDGSLR PVDRVPQEIK
ALYATAFEVE TSWIVEAAAR RQKWIDQAQS LNIYMAGASG KKLDDTYKLA WLRGLKTTYY
LRTMGATHAE KSTVKAGKMN SVSSGPEASG SGKSALEVAA AAAQAQMNAS PATDIKFCAI
DDPGCEACQ
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