Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1042 |
Symbol | |
ID | 4012260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1067822 |
End bp | 1069561 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637940720 |
Product | urocanate hydratase |
Protein accession | YP_547893 |
Protein GI | 91786941 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2987] Urocanate hydratase |
TIGRFAM ID | [TIGR01228] urocanate hydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0991609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCA AGGATTCCTT CATCGCCCCC ACCGACGCCC AAAGCGGCAC CCTCACCGAC CCGCGCGTCG ACCCCACCCG TGTGATCCGC GCGCCGCGCG GCAGCCAGCT CCATTGCAAA AGCTGGCTCA CCGAAGCCGC CTTTCGCATG ATCCAGAACA ACCTCGACCC CGAGGTGGCC GAGAACCCGC AAAGCCTGGT GGTCTACGGC GGCATCGGCC GCGCCGCACG CGACTGGGCC TGCTTCGACC AGATTCTGGC TTCGCTGAAA GAACTAAACG ATGACGAATC GCTGTTGGTC CAGTCAGGCA AGCCCGTGGG CGTATTCAAG ACCCACGCCA ACGCGCCTCG CGTGCTGATC GCCAACTCCA ACCTGGTGCC CAAGTGGGCC AACTGGGAAC ACTTCAACGA ACTCGACCGC AAGGGCCTCT TCATGTATGG CCAGATGACG GCCGGCAGCT GGATCTACAT CGGCAGCCAG GGCATCGTGC AGGGCACCTT CGAGACCTTC GTCGAAGCCG GCCGCCAACA CTACAACAAC AGCCTCGCTG GCAAATGGAT CCTGACCGCG GGCCTGGGCG GCATGGGGGG CGCGCAGCCG CTGGCAGCAA CCTTGGCCGG CGCGGTGTCG CTGAACATCG AGTGCCAGCA AAGCAGCATC GACTTCCGCC TGCGCACCCG CTACGTGGAC AAGCAGGCCA GGGACATCGA CGACGCGCTG GCGCTGATCA AGTACCACAC CGACCGCAAG GAGGCCGTGT CGATCGCGCT GCTGGGCAAC GCCGCCGACA TCCTGCCCGA GCTGGTGAAG CGCGCCAAAG CCGGCGCCAT CAAGCCCGAC CTGGTGACCG ACCAGACCTC GGCCCACGAC CTGATCAACG GCTACCTGCC CCGCGGCTGG AACGTGGCGC AGTGGAAGGC CGCGCAGCAG GATCCGGCGC AGCACAAGCG CCTGACGGAC GAAGCCGCCC AAAGCTGCGC CGTGCATGTG CAGGCCATGC TGGACTTCCA GGCCATGGGC ATCCCGACCG TGGACTACGG CAACAACATC CGCCAGGTGG CCTTCGACCA GGGCGTGAAA AACGCCTTTG ATTTCCCCGG CTTTGTGCCC GCCTACATCC GCCCGCTGTT CTGCGAAGGC AAGGGCCCGT TCCGCTGGGT CGCGCTCTCC GGCGATCCGG AAGACATCTA CAAGACCGAC GCCAAGATCA AGGAGCTGTT CCCCGAGAAC AAGCACACGC ACCGCTGGCT CGACATGGCG CGCGAGCGCA TCGCCTTCCA GGGCCTGCCC GCACGCATCT GCTGGCTGGG CCTGGGTGAA CGCCACATTG CGGGTCTGGC CTTCAACGAG ATGGTGAAGA AGGGCGAGCT CAAGGCCCCG ATCGTGATCG GCCGCGACCA CCTGGACACC GGCTCGGTGG CCAGCCCGAA CCGCGAGACC GAGGCCATGA AGGACGGCAC CGATGCCGTG TCCGACTGGC CGCTGCTCAA CGCGCTGCTC AATGCCTCGG GCGGCGCCAC CTGGGTCAGC CTGCACCACG GCGGCGGCGT GGGCATGGGT TACTCGCAGC ATGCGGGCAT GGTCATCGTG GCCGACGGCA CCGATGCCGC CGCCGAGCGG CTGGCACGCG TGCTGGTCAA CGACTGCGGC TCGGGCGTGA TGCGCCATGC CGACGCGGGT TACGAGATCG CCATTGCCAC CGCGAAGAAG CAGGGCCTCA AGCTGCCGAT GGTCCGGTGA
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Protein sequence | MNAKDSFIAP TDAQSGTLTD PRVDPTRVIR APRGSQLHCK SWLTEAAFRM IQNNLDPEVA ENPQSLVVYG GIGRAARDWA CFDQILASLK ELNDDESLLV QSGKPVGVFK THANAPRVLI ANSNLVPKWA NWEHFNELDR KGLFMYGQMT AGSWIYIGSQ GIVQGTFETF VEAGRQHYNN SLAGKWILTA GLGGMGGAQP LAATLAGAVS LNIECQQSSI DFRLRTRYVD KQARDIDDAL ALIKYHTDRK EAVSIALLGN AADILPELVK RAKAGAIKPD LVTDQTSAHD LINGYLPRGW NVAQWKAAQQ DPAQHKRLTD EAAQSCAVHV QAMLDFQAMG IPTVDYGNNI RQVAFDQGVK NAFDFPGFVP AYIRPLFCEG KGPFRWVALS GDPEDIYKTD AKIKELFPEN KHTHRWLDMA RERIAFQGLP ARICWLGLGE RHIAGLAFNE MVKKGELKAP IVIGRDHLDT GSVASPNRET EAMKDGTDAV SDWPLLNALL NASGGATWVS LHHGGGVGMG YSQHAGMVIV ADGTDAAAER LARVLVNDCG SGVMRHADAG YEIAIATAKK QGLKLPMVR
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