Gene Bpro_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1002 
Symbol 
ID4012375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand- 
Start bp1018151 
End bp1018819 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content61% 
IMG OID637940681 
Productpeptidase M50 
Protein accessionYP_547854 
Protein GI91786902 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.693021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.000264691 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACATCG CCAACCTGAT TCAAACCGTC GCCATTTATG CGCTGCCTGT GCTGTACGCC 
ATCACGGTGC ACGAAGCGGC GCACGGCTAT GTAGCCCGCC ATTTCGGTGA CAACACCGCC 
TGGGTGCAGG GCCGCGTGAC ACTCAACCCC ATCAAGCATA TTGACCCGCT GGGCACCATC 
GTGATGCCGC TGGTGCTTTA CCTGGCCACA TCGGGCGCAT TTTTGTTCGG CTACGCCAAG 
CCGGTCCCGG TGGAGTTTGG CAACCTGCGC AACCCCAAGC GCGACATGGT CTGGGTGGCG 
CTGGCCGGTC CCGGCGCCAA TCTCCTTCAA GCCTTGCTCT GGGGCATCCT GCTGTACTTG 
CTGCGCGGCG CCGACATCAC CGAACCGTTT TTCATCCGGA TGTGCCAGGC GGGCGTGCTG 
GTCAATGTGG TGATGTTTGT CTTCAATCTG TTTCCGCTGC CACCGCTCGA TGGTGGCCGC 
ATTCTGGTGG GCCTGTTGCC CTACAAGCAG GCGGTGCTGG TGTCGCGCAT CGAGCCCTGG 
GGCTTTTTTG TGGTGATGGC GCTGGTGCTT GCCGGCGTGA TCAGCAATCT CTGGATGCGC 
CCGCTGATGG CGCTGACCTA CACCTTTCTG GAAACCGTGT TGATGCCCCT GGCCATGCTG 
GTGCGATGA
 
Protein sequence
MDIANLIQTV AIYALPVLYA ITVHEAAHGY VARHFGDNTA WVQGRVTLNP IKHIDPLGTI 
VMPLVLYLAT SGAFLFGYAK PVPVEFGNLR NPKRDMVWVA LAGPGANLLQ ALLWGILLYL 
LRGADITEPF FIRMCQAGVL VNVVMFVFNL FPLPPLDGGR ILVGLLPYKQ AVLVSRIEPW 
GFFVVMALVL AGVISNLWMR PLMALTYTFL ETVLMPLAML VR