Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0850 |
Symbol | prfA |
ID | 4011353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 870795 |
End bp | 871916 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637940530 |
Product | peptide chain release factor 1 |
Protein accession | YP_547704 |
Protein GI | 91786752 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.95925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCAT TTCTTCGCCA AACCCTGGAC CGCCAGCTTC TGCGGCTGCA TGAACTGGAT TCGCTGCTGT CAGCCACCGA CGTCGTGAGT GACCTGGACC GCTTTCGGGC GCTGACCCGC GAGCATGCCG AAGCCAGCGT GGTGGCCGAG CAATACACCC GGCTCACCAG CCGCGAGGCC GACCTGGCCA GCGCCGAGGG CATGCTGGCC GAAGCCAAAG ACGACCCCGA GATGGCAGCC ATGGCCGAAG AGGAAATCGC CGCCGCCAAG CTGGATATTG CCCAACTCGA TGAGGCCCTG CAGCTGATGC TGATTCCCAA GGACCCGGAC GACGCGCGGG CGGCCTTTAT CGAAATCCGC GCCGGCACGG GCGGCGACGA GTCGGCACTG TTTGCCGGCG ATCTCTTTCG CATGTACACG CGCTTTGCCG AGCGCAACCG CTGGCAGGTC GAGATCATCA GCGAATCGCC CAGCGAGCTC GGTGGCTACA AGGAAGTGGT GTTGCGCATG GACGGTCCGA CCGATGCCAC GGGTGTGGGC GTGTACGGCA AGCTGCGGTT TGAATCGGGC GGCCACCGCG TGCAACGCGT GCCCGCCACC GAAACCCAGG GCCGCATCCA CACCAGTGCC TGCACCGTGG CCGTGCTGCC CGAGCCCGAT GAGGCGGTGG CCATCCAGAT CAACCCGGCC GACCTGCGCA TAGACACCTA CCGCGCCAGC GGCGCCGGCG GCCAGCACAT CAACAAGACC GACTCGGCCG TGCGCATCAC GCACATCCCG ACCGGCATCG TGGCCGAATG CCAGGATGAC CGCAGCCAGC ACCGCAACAA GGCCAAGGCG CTGCAGGTGC TGTCAGCCCG CATCGTGGAA AAAGACCGCT CGGAGCGCGC GGCGAAGGAT GCGGCCATGC GCAAGGGCCT GGTCGGCAGC GGCGACCGCA GCGACCGCAT ACGCACCTAC AACTTCCCGC AGGGGCGCCT GACCGACCAC CGCATCAACC TGACGCTGTA CAAGCTGCTG GCCATCATGG AAGGCGATTT GGGCGATGTG ATCACCGCGC TGCAGGTGGC GCGCGGCGCC GAACAGCTGG CAGAGCTGGA AACCGCCAGC AACGGTTTCT AG
|
Protein sequence | MKPFLRQTLD RQLLRLHELD SLLSATDVVS DLDRFRALTR EHAEASVVAE QYTRLTSREA DLASAEGMLA EAKDDPEMAA MAEEEIAAAK LDIAQLDEAL QLMLIPKDPD DARAAFIEIR AGTGGDESAL FAGDLFRMYT RFAERNRWQV EIISESPSEL GGYKEVVLRM DGPTDATGVG VYGKLRFESG GHRVQRVPAT ETQGRIHTSA CTVAVLPEPD EAVAIQINPA DLRIDTYRAS GAGGQHINKT DSAVRITHIP TGIVAECQDD RSQHRNKAKA LQVLSARIVE KDRSERAAKD AAMRKGLVGS GDRSDRIRTY NFPQGRLTDH RINLTLYKLL AIMEGDLGDV ITALQVARGA EQLAELETAS NGF
|
| |