| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0842 |
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| Symbol | |
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| ID | 4010958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 865142 |
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| End bp | 866359 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637940522 |
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| Product | type II secretion system protein |
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| Protein accession | YP_547696 |
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| Protein GI | 91786744 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0345915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.647422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTG CAGTATCCAA AGGCGTCAAG GAATTTGTTT TCGAGTGGGA GGGCAAGGAC
CGGGGGGGTA AACCGGTCCG TGGCGAGATC CGTGCCTCTG GCGAGAACCA GGTCAAGTCT
TCCTTGCGCC GGCAGGGTGT GTTGCCCACC AAAATCAAGA AGCGCAGCAT GCGCTCGGGC
AAGGCCATCA AGCCCAAGGA TATTGCCATT TTCACCCGCC AGCTCGCCAC GATGATGAAG
GCGGGTGTGC CCCTGTTGCA GTCATTTGAC ATCGTCGGTC GCGGCAACCC CAACGGCAGC
GTGACCAAAC TGCTCAATGA TGTACGCACC GATGTGGAAA CCGGGACTTC GCTGAGCGCT
GCGTTTCGCA AATATCCGCT GTATTTCAAT GCGCTGTATT GCAACCTTGT CGAGGCCGGT
GAAGCCGCCG GTATTCTTGA GTCCCTGCTG GATCGCCTGG CGGTCTACAT GGAAAAGACC
GAGGCCATCA AGTCAAAAAT CAAGTCCGCC CTGATGTACC CGATCTCGGT GGTTGTGGTG
GCCTTTGTGG TGGTGGCGGT GATCATGATT TTTGTGATCC CGGCCTTCAA GGAGGTGTTT
ACCTCGTTTG GTGCCGATTT GCCGGCACCC ACGCTGTTTG TGATAGCCGT CAGCGAGTTC
TTCGTGGCTT ACTGGTGGCT GATTTTTGGA GGCATTGGTG GCTCCCTGTA TTTTTTCATG
CAGGCGTGGA AGCGCAACGA AAAGATGCAG AAGTTCATGG ACCGGCTCCT GCTCAAGGTG
CCCGTGTTTG GGCCCCTCAT TGAAAAGTCA TGTATTGCCC GCTGGACCCG TACGCTCTCC
ACCATGTTTG CGGCCGGCGT GCCGCTCGTG GAGGCGCTGG ATTCCGTGGG AGGCGCATCC
GGCAATTCGC TCTATGCTGA TGCCACGGAA AAAATCCAGC AGGAAGTTTC CACCGGCACC
AGCCTGACGG CGGCGATGGG CAATGCCAAC CTGTTTCCCA CCATGGTGCT GCAGATGTGC
GCCATCGGTG AGGAGTCCGG CTCGGTCGAC CACATGCTGG GCAAGGCCGC CGATTTCTAT
GAGGCGGAAG TCGATGAAAT GGTGGCCGGC CTGTCCAGCC TGATGGAGCC TATCATCATC
GTGTTTCTGG GCACGTTGAT TGGCGGTATC GTGGTTTCCA TGTACCTGCC CATTTTCAAG
CTGGGTCAAG TCGTTTAA
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| Protein sequence | MATAVSKGVK EFVFEWEGKD RGGKPVRGEI RASGENQVKS SLRRQGVLPT KIKKRSMRSG
KAIKPKDIAI FTRQLATMMK AGVPLLQSFD IVGRGNPNGS VTKLLNDVRT DVETGTSLSA
AFRKYPLYFN ALYCNLVEAG EAAGILESLL DRLAVYMEKT EAIKSKIKSA LMYPISVVVV
AFVVVAVIMI FVIPAFKEVF TSFGADLPAP TLFVIAVSEF FVAYWWLIFG GIGGSLYFFM
QAWKRNEKMQ KFMDRLLLKV PVFGPLIEKS CIARWTRTLS TMFAAGVPLV EALDSVGGAS
GNSLYADATE KIQQEVSTGT SLTAAMGNAN LFPTMVLQMC AIGEESGSVD HMLGKAADFY
EAEVDEMVAG LSSLMEPIII VFLGTLIGGI VVSMYLPIFK LGQVV
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