Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0833 |
Symbol | |
ID | 4010948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 855674 |
End bp | 857416 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637940512 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_547687 |
Protein GI | 91786735 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.508251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCT CCCAGTTCTT CATTTCCACC CTCAAGGAAG CCCCTGCGGA TGCGGAGATC GTCAGCCACC AGCTCATGAT GCGCGCCGGT ATGATCAAAA AGCTCGGTGC CGGCATATAC AGCTACATGC CCATGGGTTT GCGTGTCATC CGCAAGGTCG AGGCCATCGT TCGTGAGGAA ATGAACCGCG CCGGCGCCGT GGAAATGACC ATGCCGGTGA TCCAGCCGGC CGAATTCTGG CAGGAGACCG GCCGGTTTGA AAAAATGGGA CCCGAACTGC TGCGCATCAA GGACCGCCAT GGCCGGGATT TCGTGGTACA GCCGACCAGC GAGGAAGTCA TCACCGATGT GATGCGCCAG GACATCAAGA GCTACAAACA GCTGCCGAAG AACCTGTACC AGATCCAGAC CAAATTCCGC GACGAGCGCC GGCCGCGTTT TGGCCTGATG CGCGGGCGCG AATTCACCAT GAAAGACGCC TACAGCTTTG ACCGCGACCA GGCCAGCGCC AAGGCCAGCT ACCAGATCAT GGCGCAGGCC TACCGGCGGA TTTTTGACCG CTTTGGCCTC ACCTACCGCG CCGTGGCCGC CGACAGCGGC GCGATTGGCG GCGACCTGAG CGAAGAATTC CAGGTGATCG CCGCCACCGG CGAAGACGCC ATCGTCTACT GCCCCGGCAG CGACTATGCG GCCAATATGG AAAAAGCCGA AGCGCTGCCG CCGCAGTGCG ACCGCAAGGC TGCATCGCAG GCCATGGTCA AGACGGCCAC ACCGGACAAG GCGACCTGCG CCGACGTAGC CCAGTTGCTG GGCATTCCGC TGGAAACGAC CGTCAAATCC CTGGTGCTGG CCACCGACCA GACCGACGAA GCCGGCAAGA TCATCAAGAC ACAGATCTGG CTGCTATTGT TGCGCGGCGA CCATGACATG AATGAAGTCA AGGTCGGCAA GGTACCCGGC CTCGCAGGGT TCCGCTTTGC CACCCTGCCA GAAATCGAGG AGCACTTTGG CTGCAAGCCC GGCTACCTGG GGCCCCTGAA CCTTCAAAAA CCGGTGAAGT TGGTGGTTGA CCGTGAGGTG GCTGCACTGA GCGACTGGGT GTGCGGCGCC AACGAGATTG ATTTCCACAT CACCGGCGTG AACTGGGGAC GCGATCTTGC TGAACCCGAG CTGGTGGCCG ACCTGCGCAA CGTGGTCGCG GGCAACCCCT CGCCCGACGG CAAGGGCGTG CTGGCCATTG AGCGCGGCAT TGAGGTGGGC CATGTGTTCT ACCTCGGCAC CAAATACAGC CAGGCCATGA ATGCCACCTT CCTGGACGAA AACGGCAAGC CGCAGTTCCT GGAAATGGGC TGCTACGGCA TCGGCATCAC ACGCCTGCCC GCTGCCGCCA TCGAGCAAAA CCACGACGAG CGCGGCATCA TCTGGCCCGA CGCCATTGCC CCGTTCACGG TGGTAATTTG CCCCATCAGC CCGGACCGCT TCGCCGACGT AAAGGCCGCC GCCGACAAGC TCTATGGCGA ACTCCTCGCC GCCGGCGTGG ACGTGATCCT CGATGACCGC GGCGAGCGCC CCGGCGCGAT GTTTGCCGAC TGGGAGCTGA TCGGCGTGCC GCACCGCGTC ACCATTGGCG ACCGTGGCCT GAAAGAAGGC CAGCTTGAAT ACCAGCACCG GCGTGACGCC GCCTCCAGCA AGGTCGATGC AGCCACTGCG CTGGACTTTC TCAAGGGGAA ACTGGCCCTG TGA
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Protein sequence | MKASQFFIST LKEAPADAEI VSHQLMMRAG MIKKLGAGIY SYMPMGLRVI RKVEAIVREE MNRAGAVEMT MPVIQPAEFW QETGRFEKMG PELLRIKDRH GRDFVVQPTS EEVITDVMRQ DIKSYKQLPK NLYQIQTKFR DERRPRFGLM RGREFTMKDA YSFDRDQASA KASYQIMAQA YRRIFDRFGL TYRAVAADSG AIGGDLSEEF QVIAATGEDA IVYCPGSDYA ANMEKAEALP PQCDRKAASQ AMVKTATPDK ATCADVAQLL GIPLETTVKS LVLATDQTDE AGKIIKTQIW LLLLRGDHDM NEVKVGKVPG LAGFRFATLP EIEEHFGCKP GYLGPLNLQK PVKLVVDREV AALSDWVCGA NEIDFHITGV NWGRDLAEPE LVADLRNVVA GNPSPDGKGV LAIERGIEVG HVFYLGTKYS QAMNATFLDE NGKPQFLEMG CYGIGITRLP AAAIEQNHDE RGIIWPDAIA PFTVVICPIS PDRFADVKAA ADKLYGELLA AGVDVILDDR GERPGAMFAD WELIGVPHRV TIGDRGLKEG QLEYQHRRDA ASSKVDAATA LDFLKGKLAL
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