| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0780 |
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| Symbol | |
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| ID | 4011162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 801194 |
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| End bp | 803608 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637940458 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_547634 |
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| Protein GI | 91786682 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCA AGCCCTCCTC TTCGAACTCA AACTCCCACG CGGTGATGCA GCCCTCCTGG
CAACGCTGGC TGATCAAGCT GGTTTTGTGG GGCGCCGGGC TGGCAGTCGC GGGGGTGGTC
GGCATCCTTC TGTTTGTAGC CGTCGCCCTG TCGGTGGCCT ACCCCAACCT GCCGGACATC
TCGGATTTGC TGGACTACCG GCCCAAGTTG CCGCTGCGTG TGTATTCCGC AGATGGCGTG
GTGATTGGCG AGTTTGGCGA AGAACGCCGC AACCTCACGC CCATCAAAGA CATCCCCCAG
GTCATGAAGG ACGCCGTGCT GGCGATCGAA GATGCCCGCT TTTTTTCGCA TGGCGGCGTG
GACTATCTTG GTGTGATCCG CGCCGGCTTT GCCAATGTGG GCCGTGCAAA AAGCCAGGGC
GCCTCCACCA TCACCATGCA GGTGGCCCGC AATGTGTACC TGTCTGCCGA AAAGAGCTAT
ACGCGCAAGA TTTATGAAAT CCTGCTGACG TTCAAGCTGG AGCACCTGCT GACCAAGGAT
CAGATCCTCG AAATCTACAT GAACCAGATT TTTCTGGGAA ACCGGGCCTA CGGCTTTGCC
GCGGCTTCGG AGGCCTACTT TGGCAAGCCC CTCAAAAACA TCTCGATCGC CGAAGCCGCC
ATGCTGGCCG GCCTGCCCAA AGCGCCCTCG GCGTACAACC CGATCGTCAA CCCCAAGCGC
GCGAAAGCCC GCCAGCTCTA CATCATTGAG CGCATGCAGG AGAACGGCTT CATCACGGCA
GAGCAGGCCA AGGCAGCCAA AGAGGAAGAG CTCCAGGTCA GGGTCGGGCG CGATAACGGC
CGGGTGCATG CCGAATATGT CGCTGAAACC GTACGCCAGC TGGTCCATAA CCAGTATGGC
GACGAAACCT ATACACGCGG CCTCAATGTC TACACCACCT TGCGCGCCGC CGACCAGACA
GTAGCTTACA AGGCCTTGCG CAAGGGCATC ATGGACTACG AGCGCCGGCA AATTTACCGC
GGTCCTGAGA AGTTCATCGA CCTTCCGGCC AACCCGCAGG AGACGGAAGA TGCGATTGAC
GACGCACTGA CCGACAACCC CGACAACGGC GACGTGATGT CGGCGGTGGT GCTGGAAGCC
ACTCCCAAGC GGATTCTCGC GATGCGCCAG AACAGCGAGA CGGTTGAAAT CACCGGCGAA
GGGCTTCGGC CGGCGCAATC CGGCCTGGCC GACAAGGCGG GCCCCAGCAT CAAAATTCGC
CGTGGCGCCC TGATCCGGGT GGCCAAAACG CCAAAAAACA CCTGGGAGAT CACCCAGCTG
CCTGAGGTCG AAGGGGCTTT TGTGGCGCTG GACCCGCGTG ATGGCTCCAT TCGCGCGCTG
GTGGGCGGGT TTGATTTTGA GAAGAACAAG TTCAACCATG TGACCCAGGC CTGGCGGCAA
CCGGGCTCCA GCTTCAAGCC CTTCATCTAT TCGGCTGCCC TGGAAAAAGG CTTCACGCCG
GCCACCGTGG TCAACGACGC GCCCCTGTTT TTTGACGCCG GCGTGACCGG CGGCCAGCCA
TGGGAGCCCA AGAACTATGA CGGCACCTTC GAGGGGCCCA TGAATTTACG GACCGGCCTG
AAAAAATCAA AAAACATGAT TTCCATCCGC ATTCTGCAGT CGGTGGGCGC GCAGTATGCA
CAGGACTGGA TCACCCACTT CGGCTTTGAA GCTGAAAAAC ATCCGGCGTA CCTGACCATG
GCACTGGGCG CCGGCTCCGT CACGCCCATG CAAATGGCCA CGGCTTATTC GGTGTTTGCC
AATGGCGGCT ACCGCGTCAA CCCCTACCTG GTGACCAAGA TCACCGACCA GCGCGGCAAG
GTGCTGCTCG AAACCACACC GCCCGTCCTG GATGAGTCCG CCAGGGCCAT CGATGCCCGC
AACGCCTTCA TCATGGACAG CCTGTTGCAG GAAGTGGCGC GCTCAGGCAC AGCCGCCAGA
GCGCAGGCGA CCCTCAAGCG CCCCGACCTC TTCGGTAAAA CCGGTACCAC CAATGACTCG
ATCGATACCT GGTTCGTCGG CTTCCAGCCC ACCCTGGCGG CAGCCGTCTG GATGGGTTAC
GACACGCCCA AAAAGCTTGG CGATCGGGAA ACCGGCGGCG GCCTGAGCCT GCCGATCTGG
ATCAACTTCA TGGAATACGC CCTGAAAGGC GTGCCGGTCA CCGAATACCC GGCGCCCGAA
GGCGTGGTGA ATGTCAATGG CGAGTGGTAC TACAACGAGT ACGCCAGGGG CTCGGGGGTG
AGCAGCGTGG GAACGCAGGA TCCGGCAGCG GTCAACGCCG GCCAACTGCC CGCCCCGGGC
ACGCCGGGCG GCCCGATTCA GGTCTTGCCA CCCTCTGACG AAAAGAAACG GATTCTGGAT
CTGTTCAAGA ACTGA
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| Protein sequence | MSSKPSSSNS NSHAVMQPSW QRWLIKLVLW GAGLAVAGVV GILLFVAVAL SVAYPNLPDI
SDLLDYRPKL PLRVYSADGV VIGEFGEERR NLTPIKDIPQ VMKDAVLAIE DARFFSHGGV
DYLGVIRAGF ANVGRAKSQG ASTITMQVAR NVYLSAEKSY TRKIYEILLT FKLEHLLTKD
QILEIYMNQI FLGNRAYGFA AASEAYFGKP LKNISIAEAA MLAGLPKAPS AYNPIVNPKR
AKARQLYIIE RMQENGFITA EQAKAAKEEE LQVRVGRDNG RVHAEYVAET VRQLVHNQYG
DETYTRGLNV YTTLRAADQT VAYKALRKGI MDYERRQIYR GPEKFIDLPA NPQETEDAID
DALTDNPDNG DVMSAVVLEA TPKRILAMRQ NSETVEITGE GLRPAQSGLA DKAGPSIKIR
RGALIRVAKT PKNTWEITQL PEVEGAFVAL DPRDGSIRAL VGGFDFEKNK FNHVTQAWRQ
PGSSFKPFIY SAALEKGFTP ATVVNDAPLF FDAGVTGGQP WEPKNYDGTF EGPMNLRTGL
KKSKNMISIR ILQSVGAQYA QDWITHFGFE AEKHPAYLTM ALGAGSVTPM QMATAYSVFA
NGGYRVNPYL VTKITDQRGK VLLETTPPVL DESARAIDAR NAFIMDSLLQ EVARSGTAAR
AQATLKRPDL FGKTGTTNDS IDTWFVGFQP TLAAAVWMGY DTPKKLGDRE TGGGLSLPIW
INFMEYALKG VPVTEYPAPE GVVNVNGEWY YNEYARGSGV SSVGTQDPAA VNAGQLPAPG
TPGGPIQVLP PSDEKKRILD LFKN
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