| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0638 |
|---|
| Symbol | |
|---|
| ID | 4011215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 645955 |
|---|
| End bp | 646947 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637940319 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_547495 |
|---|
| Protein GI | 91786543 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGCC CTTCAATTTC CCGGCGTATG CTGTTGCAGG TCGCTGGCCT TGGCGCCTCG
GCGCTGGCCT TGCCGCATGC ACTGGGGCAG TCGACATGGC CGTCGCGGCC GGTTCGCTTT
GTGGTGCCGT TTGCACCGGG GGGCACCTCC GAAATCGTCG CGCGCTCGGT GGCCGCCGAG
CTCAGCAAGC AGCTTGGGCA AAGTGTCTAT GTCGAAAACA AGCCGGGCGG GGCGGGCACG
GTGGCGATGC AGGAGGTGGC CAAGTCCCCG GCCGACGGGC ACACCATCAT CCTCGGGCAT
GTGGGCACGC TGGCCGTCAA TCCCTACATG CTGAAAAACC AGCCCTATGA CGTGAACAAG
GATTTCATTC CGGTGACCCT GCTGGCCAAG GTGCCCAATG TCTTTGTGAT CCACCCGGAT
GTACCGGCCA AGAATTTCCA GGAGTTTGTC GCCTATGTGA AGAAAAACCC GGGCCAACTC
AACTATGGCT CGGCCGGCAA TGCCAGCGCC GGGCATCTGG CCATGGAGTA TCTGAAGCTG
GTCACCGGCA TGTTCATCAC GCACATTCCT TACCGCGGCA CCGGCCCGCA GCTGACCGAT
CTGATTTCGG GCCGTACCCA GGCCTCGTCA GCCGGCCTGC CGGCCCTGAG CGCGCACATC
AAGAGCGGCA AATTGCGCGC TATCGCGGTG GGCACCGCGC AGCGTATTTC CGGCCTGCCC
GATGTGCCCA CCGTGGCCGA GATGGGCTTC AAGAACTTTG AGACCTCGCA GTGGTACGGC
ATTCTGGCGC CGGCCGGCAC GCCCGCGGAC GTCGTCAGGC ATCTGCAGGA AGAGTCGCTG
AAGGCGCTCA AGTCCTCGGC CGTCACCGCC CGCTTCGCCA CCGACAATGC GGTCGGCGGC
GGCGGGCCGT CCAGCGAATT TGCCGCGTTT ATCGCGAGCG AACAAAAGAT CTGGAGCGAT
ATCGTCAAGC GCGCCGGCAT CCATGCTGAT TAA
|
|---|
| Protein sequence | MMSPSISRRM LLQVAGLGAS ALALPHALGQ STWPSRPVRF VVPFAPGGTS EIVARSVAAE
LSKQLGQSVY VENKPGGAGT VAMQEVAKSP ADGHTIILGH VGTLAVNPYM LKNQPYDVNK
DFIPVTLLAK VPNVFVIHPD VPAKNFQEFV AYVKKNPGQL NYGSAGNASA GHLAMEYLKL
VTGMFITHIP YRGTGPQLTD LISGRTQASS AGLPALSAHI KSGKLRAIAV GTAQRISGLP
DVPTVAEMGF KNFETSQWYG ILAPAGTPAD VVRHLQEESL KALKSSAVTA RFATDNAVGG
GGPSSEFAAF IASEQKIWSD IVKRAGIHAD
|
|---|
| |