Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0603 |
Symbol | |
ID | 4011238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 609831 |
End bp | 610613 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637940285 |
Product | ABC transporter related |
Protein accession | YP_547461 |
Protein GI | 91786509 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.15363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAAGA AAATCGGCGA CGTCATTCTC GACGTCAGCA ACATCTCCCT GAGCTTTGGC GGCGTCAAGG CGCTGTCCGA TATTTCCTTC AATGTGAAGG AGCACGAGAT ACGCGCCATC ATCGGCCCCA ACGGCGCAGG CAAGAGCTCC ATGCTCAACT GCATCAACGG CGTCTATTCG CCCCAGCAGG GAGCCATCAC CTTTCGCGGC CAGACCTTCA AGCACATGAA CAGCCACCAG GTCGCGGTGA TGGGTGTGGC CCGCACCTTC CAGAACCTGG CGCTGTTCAA GGGCATGAGC GTGCTGGACA ACATCATGTC GGGCCGCAAC CTCAAGATCA AAAGCAACCT GCTGCTGCAG GCGCTGCGGA TTGGCCCGGC CGAGAAAGAG GAAATCATGC ACCGCGAGGC GGTCGAGAAA ATCATCGACT TTCTCGAGAT CCAGGCCTTC CGCAAAACAC CGGTCGGCCA GTTGCCCTAC GGACTGCAAA AACGCGTCGA CCTGGGCCGG GCGCTGGCCA TGGAGCCGCA GGTCCTGCTG CTTGACGAGC CCATGGCCGG CATGAACGTC GAAGAAAAGC AGGACATGTG CCGCTTTGTC CTCGACGTGA ACGACGAGTT CGGCACCACC GTGGTATTGA TCGAGCACGA CATGGGCGTG GTGATGGACA TTTCCGACCG CGTGGTGGTG CTGGACTACG GCAAGAAGAT TGGCGACGGC ACCCCCGATG AAGTCCGCAA CAACCCCGAC GTGATCCGGG CTTACCTGGG TGTGGAGCAC TGA
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Protein sequence | MHKKIGDVIL DVSNISLSFG GVKALSDISF NVKEHEIRAI IGPNGAGKSS MLNCINGVYS PQQGAITFRG QTFKHMNSHQ VAVMGVARTF QNLALFKGMS VLDNIMSGRN LKIKSNLLLQ ALRIGPAEKE EIMHREAVEK IIDFLEIQAF RKTPVGQLPY GLQKRVDLGR ALAMEPQVLL LDEPMAGMNV EEKQDMCRFV LDVNDEFGTT VVLIEHDMGV VMDISDRVVV LDYGKKIGDG TPDEVRNNPD VIRAYLGVEH
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