Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0602 |
Symbol | |
ID | 4011237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 608679 |
End bp | 609608 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637940284 |
Product | inner-membrane translocator |
Protein accession | YP_547460 |
Protein GI | 91786508 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.650417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTTT TTCTGGAAAC ACTCTTTGGC GGCCTGATGG CCGGCATGCT GTATTCGCTG GTGGCACTGG GCTTTGTGCT GATCTTCAAG GCATCGGGCG TCTTCAACTT CGCGCAGGGC GCCATGGTGC TGTTCGCCGC GCTGGCCATG GCCCGATTCT CCGAATGGAT CCCGCAATGG ACGGGCATCG ACAACCTCAT CCTCGCCAAC GCGGCCGCCT TCGTGATCGC CGGCCTCATC ATGTTTGCGG TAGCGTGGCT GATCGAGCGG CTGGTGCTGC GCCACCTGGT CAACCAGGAG GGCGCGACGC TGCTGATGGC CACGCTGGGC ATCGCCTACT TCATGGAAGG CCTGGGCCAG ACCCTGTTTG GCAGCAACAT CTACAAGATC GACATCGGCA TGCCCAAGGA GCCGATTTTT GTCGCCGACG GCATGTTCCC GGGTGGCATC CTGATCAACA AGGAAGACCT GATTGCCGCT GTGATTGCCG CGGCACTGGT CGCGTTGCTG AGCCTCTTTT TCCAGAAAAC CGCGACGGGC CGCGCCCTGC GTGCGGTGGC CGATGACCAC CAGGCCGCGC AGTCCATCGG CATTCCGCTG AACCGCATCT GGGTCATCGT CTGGTGCGTG GCAGGCGTGG TGGCACTGGT GGCCGGGATG ATCTGGGGCA GCAAGCTGGG TGTCCAGTTC TCGCTCACCA CGGTGGCGCT GCGCGCCTTG CCGGTGGTGA TTCTCGGCGG CCTGACCTCG GTGCCGGGCG CCATCATCGG CGGGCTGATC ATTGGTGTCG GCGAAAAGCT GTCCGAGGTG TACCTCGGCC CCTTTGTCGG CGGCGGCATC GAGATCTGGT TTGCCTATGT GCTGGCGCTC GGATTCCTGC TGTTCAGGCC GCAGGGATTG TTCGGCGAAA AAATAATCGA TCGCGTATAG
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Protein sequence | MAFFLETLFG GLMAGMLYSL VALGFVLIFK ASGVFNFAQG AMVLFAALAM ARFSEWIPQW TGIDNLILAN AAAFVIAGLI MFAVAWLIER LVLRHLVNQE GATLLMATLG IAYFMEGLGQ TLFGSNIYKI DIGMPKEPIF VADGMFPGGI LINKEDLIAA VIAAALVALL SLFFQKTATG RALRAVADDH QAAQSIGIPL NRIWVIVWCV AGVVALVAGM IWGSKLGVQF SLTTVALRAL PVVILGGLTS VPGAIIGGLI IGVGEKLSEV YLGPFVGGGI EIWFAYVLAL GFLLFRPQGL FGEKIIDRV
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