| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0568 |
|---|
| Symbol | |
|---|
| ID | 4010991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 570625 |
|---|
| End bp | 571314 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637940250 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_547426 |
|---|
| Protein GI | 91786474 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.850064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACG TCAACAAGCT TCATGTCAGC TACGGGCAAA GCGAGGCGCT GCACGGCATC
ACCTTCTCTG CCAAGAAGAA TGAAACCGTG GCCATCATGG GCCGCAACGG CATGGGCAAG
ACCACGCTGT TCAAGTCGCT GATCGGCATC CTGCCGCTCA AGTCGGGAAC CATAGACATC
GACGGCAAGG ACATCTCCAG GGACGAGAGC TATCAGCGGG TCGCCAAGGG GGTGGCCTAT
GTGCCGCAGG GCCGCATGAT TTTCCCGACG CTCACCGTCG AGGAGAACAT CCAGACCGGG
CTGGAAAATG CGCGCCACAA GCAGATTCCG GAAGAAATCT ATGCGCTGTT TCCGGTGCTT
TTCGACATGC GCGGCCGCAA GGGCGGCAAC CTGTCGGGCG GGCAGCAGCA GCAGCTGGCC
ATTGCCCGCG CGCTGGTCAC CAACCCCAAG GTGCTGCTGC TGGACGAACC TACGGAAGGC
ATTCAGCCCT CCATCATCAA GGACATCGCC AAAGCGCTCA ACGAAATCCG CAAGATGCGT
GAAATCACGA TTGTGGTTTC TGAGCAGGTG CTGAGCTTCG CGATGGATGT GGCCGACCGC
CTGTTCGTCA TCGAGGGCGG GCAACTGGTG CACGAGAGCA CGCGGGCCGG CACCGATACG
GCGCGCATCA AGCAATTCCT TTCTGTCTGA
|
|---|
| Protein sequence | MLNVNKLHVS YGQSEALHGI TFSAKKNETV AIMGRNGMGK TTLFKSLIGI LPLKSGTIDI
DGKDISRDES YQRVAKGVAY VPQGRMIFPT LTVEENIQTG LENARHKQIP EEIYALFPVL
FDMRGRKGGN LSGGQQQQLA IARALVTNPK VLLLDEPTEG IQPSIIKDIA KALNEIRKMR
EITIVVSEQV LSFAMDVADR LFVIEGGQLV HESTRAGTDT ARIKQFLSV
|
|---|
| |