| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0553 |
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| Symbol | |
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| ID | 4011285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 552207 |
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| End bp | 553217 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637940235 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_547411 |
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| Protein GI | 91786459 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.373091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGC CCTCCCGACT GCCCCTGATC ACCCGCCTGG CCGCCGCTGC GGCCCTGACG
CTGGCCTCTG CCATGCTGCC CGTCGCGGCA CAGCAGAAGC TGCAGATTGC CGGCAACTTT
GCCTCGGAGC ACCCGAGCAG CGTGGCGGTC GAACAGGTGT TCAAAAAAGA GGTTGCACGC
CTGACCAACA ACCAGCTGCA GGTCGATGTG TTTCCCGCCA TGCAACTGGG CGGCGCCAAG
GAGAACGTCG ACGCCGTGCG CTCCGGCACA CTGGCGCTGA CCTGGGTCGG CGCCGCCTTC
CTGTCGCGCA TCGCGCCTGA ACTCGAGGCG GTCAGCCTGC CCTTCGTGTT CGCAAACCGG
CAAAGCGCGT TTCGGGTGAT TGACGGTCCG GTCGGCGATG CCATCGACAG GAAGCTGGGC
GACAAGGGCT TCATCTCGCT CGGCTGGATG GAGCTGGGCA TGCGCAACGT CACCAACAGC
CGGGGGCCGA TCAAAAGCAT GGCCGACCTC AAGGGCCTGA AGATCCGCCT GCAGCCCAAC
GAGACCCACC TGGCCACGTT CCGGGCGCTC GGCGCCAACC CGGTGGCGAT GGACGTCAAG
GAGCTGTACT CGGCACTCGA GCAGCGTGTG GTGGATGCGC AGGAGAACCC GTACACCGTG
ATCTCGGCCG CGCGTTACAG CGAGGTGCAA AAACAGCTGT CCAACAGCGG GCATTTCTTT
GACCTCATTG CCGTGGTCGC GAGCAAAAAA GCCTTCGAGC AGCTCAAGCC CGAATACCAG
AAGGCCATAC GCGAAGCGAT GACCGCCACC ATTGCCTTTC AGCGCAAGCT GGCCGCCGAG
GACGAGGCCA AGCGCCTGGC CGAACTGAAG GGCAAGATGA CCTACACCGA AATCACGCCT
GCCGCGCTGG AGGAAATGCG CCGCGCGACC GCCCCCGTCA TCGAGGACGT GAAGAAGCGT
GCCGGCGCTG ACCTGGTGAA CCAAGTGCTG GCCGAAGCCG CCAGGCGCTG A
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| Protein sequence | MNQPSRLPLI TRLAAAAALT LASAMLPVAA QQKLQIAGNF ASEHPSSVAV EQVFKKEVAR
LTNNQLQVDV FPAMQLGGAK ENVDAVRSGT LALTWVGAAF LSRIAPELEA VSLPFVFANR
QSAFRVIDGP VGDAIDRKLG DKGFISLGWM ELGMRNVTNS RGPIKSMADL KGLKIRLQPN
ETHLATFRAL GANPVAMDVK ELYSALEQRV VDAQENPYTV ISAARYSEVQ KQLSNSGHFF
DLIAVVASKK AFEQLKPEYQ KAIREAMTAT IAFQRKLAAE DEAKRLAELK GKMTYTEITP
AALEEMRRAT APVIEDVKKR AGADLVNQVL AEAARR
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