| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0549 |
|---|
| Symbol | |
|---|
| ID | 4011281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 548183 |
|---|
| End bp | 548950 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637940231 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_547407 |
|---|
| Protein GI | 91786455 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACACCTT CGGGTGAAGA TGCACTCGAT AGAATGCAGT CACCCTCCTC CACCAATCAG
ACCGACATGA CCAGCACGCG CCAGTCCACG AGCCGCCTCG ACCGGGAAAA CACGATCGAT
GCGATCTATG AAAGGATCTA TGTCGCCATT CTGGAACACC GCCTGCACCC CGGCACCAAG
CTGGGCGAGG AAAGGCTGGC CGACATCTTT GGTACCAGCC GGGCGCGCAT CCGCGAGGTG
CTGGCCCGCC TGGCGCACGA GCAGATCGTC GAGCTCTACC CACAGCGCGG AGCCTACCTG
GCCAAGCCCT CCATCGAGCA GGCGCGGGAC GTGTTCGAGG CGCGCCGGCT GATCGAGCCC
GCCGTGCTCA AGCGCCTGAT CGACACCCTC ACCCCGGAGA AAATTGCCCG CCTGCGGCAA
CACCAGGAAC TGGAGCTCGA TGCCCGCCGG CGCGAAGACA AGCGCACCGT GATCCGGTTG
TCCGGCGAAT TCCACACGTT GACAGCGGAG CTTGCGGGCA ATTCGGCACT GGCCAGAAGC
ATGCGCGAAC TCTGCATGCT CACCTGCCTC ATCATCTTCC TGTACGACGC GCCCACGGCC
AGCAGTTGCC GTGCCGACGA GCACACGGTG ATCGTCGACG CGATCGCCAA GCGCGACCGG
GTACGCGCCG AAAAACTCAT GCTGGATCAC CTGCACCACA TCGAGCACAG CCTCAAGCTC
GACAGCACCG CCGGGGAAGC GGATCTCGAG GCGATTTTCG GCAGCTGA
|
|---|
| Protein sequence | MTPSGEDALD RMQSPSSTNQ TDMTSTRQST SRLDRENTID AIYERIYVAI LEHRLHPGTK
LGEERLADIF GTSRARIREV LARLAHEQIV ELYPQRGAYL AKPSIEQARD VFEARRLIEP
AVLKRLIDTL TPEKIARLRQ HQELELDARR REDKRTVIRL SGEFHTLTAE LAGNSALARS
MRELCMLTCL IIFLYDAPTA SSCRADEHTV IVDAIAKRDR VRAEKLMLDH LHHIEHSLKL
DSTAGEADLE AIFGS
|
|---|
| |