Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0530 |
Symbol | |
ID | 4011399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 529417 |
End bp | 530106 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637940214 |
Product | haloacid dehalogenase, type II |
Protein accession | YP_547390 |
Protein GI | 91786438 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGCCA TCAAAGCCGT TGTTTTTGAC CTGTACGGTA CCTTGTACGA CGTTTACTCT GTCCGCACCT CCTGCGAGCG CATCTTCCCC GGCCAGGGCG AGATGGTCAG CAAGATGTGG CGCCAAAAGC AACTTGAATA CACATGGATG AGAACGCTGA TGGGCCAGTA CCAAGACTTC GAGAGCGCCA CCCTCGATGC GTTGCGCTAC ACCTGTGGCA GTCTAGGTCT GGCGCTCGAT GCAGACGGTG AAGCACACCT GTGCTCGGAG TACCTGAGTC TGACCCCTTT CGCGGATGTT CCACAGGCGC TTCAGCAGTT GCGGGCCGCA GGGCTGAAAA CCGCCATTTT GTCCAACGGT TCGCGCCATT CCATCCGCCA GGTGGTGGGC AATTCGGGGT TGACCAACTC CTTCGATCAC TTGATCAGCG TTGACGAAGT GCGGCTGTTC AAACCGCACC AGAAAGTTTA TGAACTTGCG ATGGATACCC TGCACTTGGG TGAATCAGAA ATTCTGTTCG TCTCATGTAA CTCATGGGAT GCGACGGGCG CCAAGTATTT TGGCTACCCG GTATGCTGGA TCAATCGCAG CAATGGCGTG TTTGATCAAC TGGGTGTCGT GCCCGACATC GTGGTCAGCG ATGTGGGCGT GCTTGCCTCG CGTTTTTCGC CGGTAGACGA GGCTGCATAA
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Protein sequence | MHAIKAVVFD LYGTLYDVYS VRTSCERIFP GQGEMVSKMW RQKQLEYTWM RTLMGQYQDF ESATLDALRY TCGSLGLALD ADGEAHLCSE YLSLTPFADV PQALQQLRAA GLKTAILSNG SRHSIRQVVG NSGLTNSFDH LISVDEVRLF KPHQKVYELA MDTLHLGESE ILFVSCNSWD ATGAKYFGYP VCWINRSNGV FDQLGVVPDI VVSDVGVLAS RFSPVDEAA
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