Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0483 |
Symbol | |
ID | 4010963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 499053 |
End bp | 500792 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637940168 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_547345 |
Protein GI | 91786393 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00131469 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGC GTAACACACG TCGGACGGCA CTGGCACTGG CCGCTGCCTG CGCAATGGCC GGGCCCGGCT GGGCAGACGA AGCCGCCGCC AGAAAATGGA TTGACGCTGA GTTTCAGCCA TCCACCCTGA GCAAAGACAA GCAACAGGCG GAGATGAAGT GGTTTATTGA TGCCGCCAAA AAGCTGCAGG CCAAGGGCGT CAAGGAAATC TCGGTGGTGT CGGAAACCAT CACCACGCAC GAATACGAAT CGAAGACGCT GGCCAAGGCC TTCGAGGAAA TCACCGGCAT CAAGGTCAAG CACGACCTGA TCCAGGAGGG TGATGTGGTC GAGAAGCTGC AGACCTCGAT GCAGTCGGGC AAGTCGATTT ATGACGGCTG GGTTTCCGAC TCCGACCTGA TCGGTACCCA CTACCGCTAC GGCAAGATCA TGAACCTGAC CGACTACATG GCCGGCAAGG GCAAGGACTA TACCAACCCT GGGCTGGACC TGAAGGACTT CATCGGCACC AAGTTCACGA CGGGTCCTGA CGGCAAGCTT TACCAGTTGC CCGACCAACA ATTCGCCAAC CTCTACTGGT TCCGCGCCGA CCTGTTTGCG CGTCAGGACC TGAAAGACAA GTTCAAGGCC AAGTATGGCT ACGACCTGGG CGTGCCGCTC AACTGGAGCG CTTACGAAGA CATCGCCGAG TTCTTCAGCG TGGACGTGAA AACCATCGAC GGCAAACCCA TCTATGGCCA CATGGACTAC GGCAAGAAAG ACCCGTCGCT GGGCTGGCGC TTCACCGACG CCTGGCTCTC GATGGCCGGG ACTGCCGACA TCGGCGCGCC CAACGGCTTG CCGGTTGATG AGTGGGGCAT CCGCGTGGCA GCAGACAAAT GCACACCGGT CGGCGCTTCG GTTTCACGCG GTGGTGCCAC CAATTCGCCC GCAGCCGTTT ATGCGCTCAC CAAGTACGTC GACTGGATGA AGAAGTACGC GCCCAAGGAG GCCACCGGCA TGACCTTCGG CGAAGCCGGG CCGGTGCCGG CGCAGGGCCA GATTGCCCAG CAGATCTTCT GGTACACCGC CTTCACGGCC GACATGACCA AGCCGGGCCT GCCGGTGGTG AATGCCGACG GCACGCCGAA ATGGCGCATG GCACCCGGCC CGAACGGTCC GTACTGGAAG CAGGGCATGC AGAACGGCTA CCAGGACGTC GGCTCGTGGA CCTTCTTCAC CAACCACGAC GCGGACCGCA CCGCCGCGGC CTGGCTGTAC GCGCAGTTCA TCACCTCGAA GACCACGTCG TTGAAGAAGA CGATCGTGGG CCTGACGCCG ATCCGCGAGT CCGACATCCA GAGCAAGGCC ATGACCGACA TGGCGCCCAA GCTGGGCGGC CTGGTCGAGT TCTACCGCAG CCCGGCACGC GTGGCCTGGT CGCCCACCGG CACCAACGTG CCCGACTACC CCAAGCTCGC GCAGCTCTGG TGGAAGAACG TGGCCGAAGC CGTGACCGGT GAAAAGACAC CACAAAAAGC CATGGACAAC CTGGCCGAAG AAATGGACAA CGTGATGGGT CGTTTGCAGC GTGCCGGCAT GGCCAACTGT GCGCCCAAGC TCAATCCTAA AGGTGATCCG GCCAAATACC TGAGTGACAA GGCGGCACCG TGGGCCAAGC TGGCTAACGA GAAGCCAAAA GGTGAAACCA TCAACTATGA CAAGTTGCTG CAAGCCTGGA AAGACGGAAA AGCGCGTTAA
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Protein sequence | MKMRNTRRTA LALAAACAMA GPGWADEAAA RKWIDAEFQP STLSKDKQQA EMKWFIDAAK KLQAKGVKEI SVVSETITTH EYESKTLAKA FEEITGIKVK HDLIQEGDVV EKLQTSMQSG KSIYDGWVSD SDLIGTHYRY GKIMNLTDYM AGKGKDYTNP GLDLKDFIGT KFTTGPDGKL YQLPDQQFAN LYWFRADLFA RQDLKDKFKA KYGYDLGVPL NWSAYEDIAE FFSVDVKTID GKPIYGHMDY GKKDPSLGWR FTDAWLSMAG TADIGAPNGL PVDEWGIRVA ADKCTPVGAS VSRGGATNSP AAVYALTKYV DWMKKYAPKE ATGMTFGEAG PVPAQGQIAQ QIFWYTAFTA DMTKPGLPVV NADGTPKWRM APGPNGPYWK QGMQNGYQDV GSWTFFTNHD ADRTAAAWLY AQFITSKTTS LKKTIVGLTP IRESDIQSKA MTDMAPKLGG LVEFYRSPAR VAWSPTGTNV PDYPKLAQLW WKNVAEAVTG EKTPQKAMDN LAEEMDNVMG RLQRAGMANC APKLNPKGDP AKYLSDKAAP WAKLANEKPK GETINYDKLL QAWKDGKAR
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