| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0474 |
|---|
| Symbol | |
|---|
| ID | 4011497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 490086 |
|---|
| End bp | 490946 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637940159 |
|---|
| Product | 4-hydroxybenzoate octaprenyltransferase |
|---|
| Protein accession | YP_547336 |
|---|
| Protein GI | 91786384 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCC GCAAACTGGG TCTTTACCTT GCGCTGATCC GCTGGAACCG TCCGGCGGGC
TGGCTGCTGC TGCTCTGGCC TACGCTGTCG GCGCTATGGG TGGCCTCGCA CGGCTTTCCG
GGCTGGCACT TGCTGACGGT GTTCACGCTG GGAACCATCC TGATGCGCAG CGCGGGCTGT
TGTGTCAACG ATGTGGCGGA CCGGGACTTT GACCGGCATG TCAAGCGCAC GGCCCAGCGG
CCGGTCACCA GCGGCCAGGT GTCGGTGCGG GAGGCGCTGG TGCTGGGTGC CGTGCTGGCC
CTGCTGGCGT TCGGCCTGGT GCTGACCACC AATGCCGCCA CCATCGCCTG GTCCTTTGCT
GCGCTGGCCG TGACGCTGGC GTACCCCTTT GCAAAGCGTT ATGTGTCCAT GCCGCAGGCG
GTGCTGGGCG TGGCTTTCAG TTTTGGCATT CCGATGGCAT TTGCCGCCGT GCAGTCCCGC
GTGCCGCTGC TGGCCTGGGT TCTGCTATTG GGCAACCTGT GCTGGGTGAT TGCCTACGAC
ACCGAGTACG CCATGGTGGA CCGCGACGAT GACCTGAAGA TAGGCATGAA AACCTCGGCC
ATCACGCTGG GGCGGTTCGA TGTGGCGGGG GTCATGCTCA GTTACCTGGT GTACCTGTCG
GTTTGGGCTC TGGCCCTTGC CGACATTCCG CAAGCAGCTA TTTATTGGAT GGCAATCGGG
CTGGCAGGGC TGCAGGCGCT GTGGCATGGC TGGCTGATCC GCAAGCGTGA GCGCGACGAT
TGCTTCAAGG CGTTTCGTCT CAATCACTGG CTGGGCTTCA CGGTGTTTGC CGGTATTGCC
CTGTCCTATC TGGCAGCTTG A
|
|---|
| Protein sequence | MLRRKLGLYL ALIRWNRPAG WLLLLWPTLS ALWVASHGFP GWHLLTVFTL GTILMRSAGC
CVNDVADRDF DRHVKRTAQR PVTSGQVSVR EALVLGAVLA LLAFGLVLTT NAATIAWSFA
ALAVTLAYPF AKRYVSMPQA VLGVAFSFGI PMAFAAVQSR VPLLAWVLLL GNLCWVIAYD
TEYAMVDRDD DLKIGMKTSA ITLGRFDVAG VMLSYLVYLS VWALALADIP QAAIYWMAIG
LAGLQALWHG WLIRKRERDD CFKAFRLNHW LGFTVFAGIA LSYLAA
|
|---|
| |