| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0416 |
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| Symbol | |
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| ID | 4011556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 429121 |
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| End bp | 430149 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637940101 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_547278 |
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| Protein GI | 91786326 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCG TCTACAGCGA TCAGCACAAA GACCACGACC CGCAGCTCTT CATGGTGCGC
GGTCGATTGA AGCGCAGCAA CGAACAGCCG GAACGCGCCT TTCGCCTGCT GTCGGCGGTC
CAGGAAGGTG GCCATGACGT CATCGCCTGC GAAGACTTCG GCGCGGGCCC GCGTGCCGCC
ATCCACACGC CGGAGTACCT GCGCTTTCTC GAAACCGCTT ACGAGCGATG GCAAGGGCTG
GACGACCCCT CGCAAGAGGT CATGCCCAAC ATCCATCCCT TTCCCGGCGA GCCCTGCACC
TACCCCGAGA GCGTGGTGGG CCAGGCCGGA TTCCACATGG GAGACAACGC CTGCTCCATC
GGCCCGCATA CCTGGCAGGC GGCCACCGCC TCGGCCCACG TGGCCACGCA TGCCGCGCAG
CTGGTGGCGG ACGGCGAGCG CGCGGCCTAC GCGCTGTGCC GCCCACCGGG CCACCATGCC
TACGCGGACC GGGCGAACGG CTTTTGCTAC CTGAACAACG TGGCCATCGC CGCGCAGCAC
CTGCGCCGGG TGCACGACCG CGTCGCCATT CTCGACATCG ACGTGCACCA CGGCAACGGC
ACGCAGGGCA TCTTCTACCG CCGCCCGGAC GTACTGACCA TTTCACTGCA TGGCGACCCG
CGCAACTTCA CGCCCTTCTT CACCGGCCAT GCGCACGAGC GGGGTGAAGG CGCAGGCCTG
GGCTACAACA TCAACAAGCC GCTGGCGCTG GGCACCGGCA TCGACGGCTA CCTGCCGGCG
TTGCGCGATG CCTGCCTGAG CGTGCGCGCC TTCGCGCCCG GCGCGCTGGT GGTGGCGCTG
GGCCTGGACG CGCACGAGCA CGACCCGTAC AAGGGCATGA AGATCACAAC GCCCGGCTTC
GCGCTGCTGC TCGCCGAGAT CGCCCGCCTG GGCCTGCCGA CCGTGCTGGT GCAGGAAGGG
GGCTACCTGT CCGACGACCT CGGCCCCAAT CTCGCCAGCG CACTGCGCGG CTTTGCGGGC
GTGGCATGA
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| Protein sequence | MKVVYSDQHK DHDPQLFMVR GRLKRSNEQP ERAFRLLSAV QEGGHDVIAC EDFGAGPRAA
IHTPEYLRFL ETAYERWQGL DDPSQEVMPN IHPFPGEPCT YPESVVGQAG FHMGDNACSI
GPHTWQAATA SAHVATHAAQ LVADGERAAY ALCRPPGHHA YADRANGFCY LNNVAIAAQH
LRRVHDRVAI LDIDVHHGNG TQGIFYRRPD VLTISLHGDP RNFTPFFTGH AHERGEGAGL
GYNINKPLAL GTGIDGYLPA LRDACLSVRA FAPGALVVAL GLDAHEHDPY KGMKITTPGF
ALLLAEIARL GLPTVLVQEG GYLSDDLGPN LASALRGFAG VA
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