| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0411 |
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| Symbol | |
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| ID | 4011551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 423691 |
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| End bp | 425004 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637940096 |
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| Product | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_547273 |
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| Protein GI | 91786321 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATC TTCCGTCCTT CGATCATTCC CGCCTGCTCG CAACGATCGA CCGGCTTGCG
CCGTCCATGA CGCAGACCCT GAGTGCCTTC GTCGCCGCGC ACAGCCCTTC CGGCGCGGAG
CAGCCGGCCG CCGAGTTTCT GGAACGCAAG CTGACGGACC TGGGGCTGGA TGCCGAGCGC
ATCGTGCTCA ACAGCAGCCT CATCGAGAGC CTGCCGCTGT TCTCCTGCCC CTGCGATCCC
GACAACGGAC GTTACAACCT GCTGGCGCGC CACCTGCCGC GCAGCACCGG GGGCCGTTCG
GTGCTGTTCA ACGGCCACCT CGACGTGGTG CCCACCGGGC CTGAATCGCT GTGGACCAAG
CCACCTTACG TGCCGTGGGT GAAAGATGGC TGGTTGCACG GCCGGGGTGC AGGCGACATG
AAGGGTGGCC TCGTCTGCGC CCTGGTGGCC TACGAGGCCT TGCGTGAACT GGGCCTGCAG
CCCGCCGGCA TCGTCGGCTT CAACGCCGTG CTGGACGAGG AAAACACCGG CAACGGCACA
CTGGCCACGG TGCACGCGCT GCAAAACGCC CTGGCCAAGG CCAGGCTCAC CGATTTCGAT
GCCGTGGTGA TTCCGGAGCC CTTTGGCGAA ACGCTGATGA GCGCCCAGGT CGGCGTGTGC
TGGCTTTTCA TCGAGATCAC CGGCAAGCCG GCGCATGTCG CCTACATGAA CCAGGGCATC
AACCCGATCG AGGCCGGCAT CGCCATCATG GCCGACCTGA AACAGCTGGA GTCCGAGTGG
AACGCGCCTG CCCAACGACA CCCGCTGTTT CGCGATGCGG CGCACCCGAT CAACTTCAAC
CTGGGCCGCA TCGAAGGCGG CGAGTGGAAT TCGTCGGTGC CCTGCACCTG TACGCTCGGC
CTTCGCTTCA GTTTTTTTCC CGGCATGACG GCCGGGGAGG CCACGCGGCA GGTCACGCAG
CGCATACGCG CCACGGCCGC GCGGGTGAAT CCGGCCTTGA CGGTCGACAT CCGTACCCGG
GGACACTTCT CGCCGGGCTG CGAATACGAC CTCGACGCAC CGGCGATGCA GGTGCTGGCC
GAGGCACACC GCAAGGTCAC CGGCGCACCA CCTGCGCAGC TGGCATGCAC CGCGACCACC
GATGGCCGCC ACTTCGCGCT GATGACGGAC ATCCCCGTCA CCGTGTACGG ACCGGTGGCG
CGCAACATCC ACGGCATCGA TGAGGCCGTC TCGCTGGACA GCATGAAGCG CGTGGCAGCG
ACCATGGCGC AATTCATGGT GGACTGGTGC GGCGTCGAAC CGCTGGCAGC TTGA
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| Protein sequence | MKNLPSFDHS RLLATIDRLA PSMTQTLSAF VAAHSPSGAE QPAAEFLERK LTDLGLDAER
IVLNSSLIES LPLFSCPCDP DNGRYNLLAR HLPRSTGGRS VLFNGHLDVV PTGPESLWTK
PPYVPWVKDG WLHGRGAGDM KGGLVCALVA YEALRELGLQ PAGIVGFNAV LDEENTGNGT
LATVHALQNA LAKARLTDFD AVVIPEPFGE TLMSAQVGVC WLFIEITGKP AHVAYMNQGI
NPIEAGIAIM ADLKQLESEW NAPAQRHPLF RDAAHPINFN LGRIEGGEWN SSVPCTCTLG
LRFSFFPGMT AGEATRQVTQ RIRATAARVN PALTVDIRTR GHFSPGCEYD LDAPAMQVLA
EAHRKVTGAP PAQLACTATT DGRHFALMTD IPVTVYGPVA RNIHGIDEAV SLDSMKRVAA
TMAQFMVDWC GVEPLAA
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