Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0401 |
Symbol | |
ID | 4011580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 412468 |
End bp | 413232 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637940086 |
Product | extracellular solute-binding protein |
Protein accession | YP_547263 |
Protein GI | 91786311 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.538689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAT TCAAGACATG GACGCTGCTT GGCCTTGCGC TGCTGGCGGC CATCACGGCA CAGGCACGCA GCCTGGATGA GGTCAGGAAA GAGGGCAAGA TCATCATTGC CACCGAAGGG CAGTTCGCGC CCTTCAATTA CTTTCAGGGC GCCAAGCTGT CGGGCTTTGA GGTCGAGCTG GCCGAATTGG TGGCCAAAAA GATGGGTGTC AGCGTCGAGT GGAAAGCCCT GGGCTTTGAC GCGCTGCTGG CGGGGCTGCG CCAGGACCGC TGGGATCTGG TGATCGCATC GCATGGCATC ACGGAAGAAC GGTCCCGCGC GGTGACGTTT GCCGACCCCC ATTACTGCTC GGGCGGATCG ATTGTGTCGC TCGATCCGGC GATTCGTACC ACCGCCGATT TGAACGGCAA GGTGATCTCG GTCCAGACCG GCAGCACCTA CATGGACAAC GTCAGGAAGC TGGCCGGCGT GAAGGATGTG AAGAACTTCC CGCAGGACAC CGATGCGCGC AGCGCGCTGG TGTCCCGCCG CGTTGATGCC TGGGTTACCG ACAAGTTTGT GGCGTCCATC GCGATTGCCG CCAATCCGGG TGCCGGCATG AAGCTGGGCG ACTTTGTCTT CATCGAGCGC ATCGCCGCCG CCGTCGGCAA GGGCAATGCG TCATTGGCAC AAGGCTACAA CAAGGCGCTG GCGGACGTGC TGGCCGATGG CAGCTACAGC GCACTGTCGA AGAGGTACTT CAATGAAGAC GTACGCTGCA AGTAA
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Protein sequence | MKRFKTWTLL GLALLAAITA QARSLDEVRK EGKIIIATEG QFAPFNYFQG AKLSGFEVEL AELVAKKMGV SVEWKALGFD ALLAGLRQDR WDLVIASHGI TEERSRAVTF ADPHYCSGGS IVSLDPAIRT TADLNGKVIS VQTGSTYMDN VRKLAGVKDV KNFPQDTDAR SALVSRRVDA WVTDKFVASI AIAANPGAGM KLGDFVFIER IAAAVGKGNA SLAQGYNKAL ADVLADGSYS ALSKRYFNED VRCK
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