| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0346 |
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| Symbol | |
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| ID | 4011639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 366248 |
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| End bp | 366976 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637940030 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_547208 |
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| Protein GI | 91786256 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000101099 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.101895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAGG GAATTGATCG CGTTGCTCTT GTTACAGGTG GCTCTGGCGG GATTGGTAGG
GCGGTGGCCG AAAAGTTGGC CAGCCAAGGT GTCGCCGTTG GGATTGCCTA CGGCAACAGC
GAAACCAAAG CTGCGGAAAC CGTTGAAAAA ATCATTGCCG AAGGTGGCCG TGCATTTGCC
ATCAAGGGGG ATGTAACGCA TGCAGCGGAC GTCAAACGTC TATTTGACGA GACGGAAAAG
AAATTTGGAA AGATAAGCGT CGTCGTCAGT GTTACCGGTT CGTTCCTTAT GAGGCCATTT
GCAGAAGCTT CGGAAGCAGA TTACGACACC GGAATGACCG TCAACGCGAA GGGCACGTAT
TTGGTTTATT CGGAAGCGGC TCGACGAGTT GTAGACGGCG GACGGATCAT TGGCATATCG
TCGAATCTGG TTTTATCGGG CCGGCCAGGC CTCGGATTGT ACGTGGCCGG CAAAGCTGCA
GTGGAGCAGT TTTCGAAGAT TCTCGCAAAG GAGCTGGGAT CGCGGCAAAT CACTGTTAAC
GCCGTCGCTC CAGGTCCAAC GGATACCGAG ATGCTTTCTG AAGCTGGTAG GAAAAGTGCG
CCGACCATCA CTCCGTTGGG TCGAATCGCG CAGCCGATCG AAATTGCAAA CGTTGTCGCA
TTCCTCGCCT CGCCCGAGGG CGGATGGGTG AATGGTCAAG TTGTCGGCGT CAACGGCGGC
ATCATTTAA
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| Protein sequence | MTKGIDRVAL VTGGSGGIGR AVAEKLASQG VAVGIAYGNS ETKAAETVEK IIAEGGRAFA
IKGDVTHAAD VKRLFDETEK KFGKISVVVS VTGSFLMRPF AEASEADYDT GMTVNAKGTY
LVYSEAARRV VDGGRIIGIS SNLVLSGRPG LGLYVAGKAA VEQFSKILAK ELGSRQITVN
AVAPGPTDTE MLSEAGRKSA PTITPLGRIA QPIEIANVVA FLASPEGGWV NGQVVGVNGG
II
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