Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0339 |
Symbol | |
ID | 4011632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 360199 |
End bp | 361746 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637940024 |
Product | integrase catalytic subunit |
Protein accession | YP_547202 |
Protein GI | 91786250 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.389244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATTCAT ACGAAGATCG CATTCGAGCA GTTAGGCTCT ACATAAAACT CGGGAAACGC ACAGGTGCGA CCATTCGGCA ATTGGGTTAC CCGACAAAGA ATGCGCTTAA GAGCTGGCAT CGAGAATACG AGCAAGGTGG CAATTTGCGG GTGGGCCATG TGCGTTCAAG ATCAAAATAC TCAGCCGAAC AGAAAAGAGT TGCCGTCGAG CATTACCTAA ACCACGATCG CTTTCTTGCT GGAACTCGAA AAGCACTGGG ATATCCGTGC CGCGATACTC TCGCAGCCTG GGTCCACGAG TTGCTCCCCG AAACACGAAG AAAAGTTGTC GGCAAGGCGC AGGCCGTGCT GCTCCCCAGA GAAGCAAAGC AGGCGGCAGT CATCGAGCTG TGCACTCGGC AGGTAAGCGC GCAAGCAATT GCTCAAAAGC TTGGCGTGAC TCGACCAACG TTGTACAAGT GGAAAAATCA ACTACTCGGT CGAGAGGCTC CCGCATCCAT GAAGCGAAGT AACGATTCCG GGTCAACTCC CAAGCCGAAA GAACTCACGG AACTACAGCA GCAAGTTGAG TTGCTCGAAC GTGACATCCG GCGTTTGCAG CTTGAACATG ACCTATTAAA GAAGGCCAAT GAACTGTTAA AAAAAGGCCT GGGCGTCGAT ATGCAACTCC TGACCAACCG GGAGAAGACA TTGCTGGTTG ACGCCCTCAA AGAGCTCTAT GCCCTGCCAG AGCTCCTTGC TCAGTTGGAT CTGGCGCGCA GCTCGTACTT CTACCATCGA GCCCGTGTAA AGATGGCGGA CAAGTACCTT GCAGTGCGGC AAACCCTCAC CGACATCTTC GAGCTGAACC ACCGCTGTTA CGGCTACCGC AGGCTGCAGG CTTCGTTGAC CAGGCAGTGC GTCACCATCT CTGAGAAGGT CGTGCAGCGG TTGATGAAAC AAGAGAGCTT GGTCGTTGCC AAGCCTAAGC GGCGTCGGTA CGGCTCCTAC TTGGGCGAAA TCAGCCCAGC GCCCGAGAAC CTCATCAATC GCGACTTCCA CGCAGCGGCC CCGAACGAGA AGTGGCTCAC CGACATCACA GAGTTCCAGA TCCCGGCCGG CAAGGTGTAC CTATCGCCCA TCATCGACTG CTTCGATGGC CTGGTCATCA GCTGGACCAT TGGGACGCAT CCCGACGCTG AGCTCGTCAA CACGATGCTG GATGCAGCCA TCGAGACGGT GGCCGGCGGC AATGACCGGC CCGTCGTCCA CTCTGATCGT GGAGCACACT ATCGCTGGCC CGGTTGGCTA TCGAGGATCG GTGACGCGAA GTTGATTCGC TCGATGTCGC GCAAGGGGTG TTCGCCTGAC AACGCGGCCT GCGAGGGTTT CTTCGGGCGA TTGAAAACGG AACTGTTCTA CCCTCGGGAC TGGAAGACCA CAACCATTGA ACAGTTCATT CAGGTAGTCG ATTCCTACAT CCGCTGGTAC AACGAGAAGC GGATCAAGAT ATCTCTTGGC TCTCTTAGCC CCATCGAATA CCGAGAGAGT CTTGGACTTA CGGCATAA
|
Protein sequence | MYSYEDRIRA VRLYIKLGKR TGATIRQLGY PTKNALKSWH REYEQGGNLR VGHVRSRSKY SAEQKRVAVE HYLNHDRFLA GTRKALGYPC RDTLAAWVHE LLPETRRKVV GKAQAVLLPR EAKQAAVIEL CTRQVSAQAI AQKLGVTRPT LYKWKNQLLG REAPASMKRS NDSGSTPKPK ELTELQQQVE LLERDIRRLQ LEHDLLKKAN ELLKKGLGVD MQLLTNREKT LLVDALKELY ALPELLAQLD LARSSYFYHR ARVKMADKYL AVRQTLTDIF ELNHRCYGYR RLQASLTRQC VTISEKVVQR LMKQESLVVA KPKRRRYGSY LGEISPAPEN LINRDFHAAA PNEKWLTDIT EFQIPAGKVY LSPIIDCFDG LVISWTIGTH PDAELVNTML DAAIETVAGG NDRPVVHSDR GAHYRWPGWL SRIGDAKLIR SMSRKGCSPD NAACEGFFGR LKTELFYPRD WKTTTIEQFI QVVDSYIRWY NEKRIKISLG SLSPIEYRES LGLTA
|
| |