| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0307 |
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| Symbol | |
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| ID | 4011678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 330259 |
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| End bp | 331257 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637939992 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_547170 |
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| Protein GI | 91786218 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCG TGCCTGCCGG ATGGCCCCTT GGGTCCATGG GGGTCATTGG GGCAATTGGC
CTGGTCTGGG CTGCAGGCTC CGCGCTGGCA CAGGCTCCCC GGGCTTTGGA AGCAGCGGCC
CTGCAAACAC CAGCGGCCGT ACTGGCGGAC GAGCCACCCG CGCTGCGCCG TCTGATGCAG
CAAGCCGGCG AGCTGGAGTC GGCGGTCGAC ACGAACGACA ACGCCTGGCG CGCCGCCGTA
CTCTATTGCG AAGCATCCCG CTCAGGCAGC ATTGAGGGGC AATACCGCCT GGGCGTGCTC
TATGCCTTTG GCAAAGGCGT CCCCGAAAGC CGGCCGCTCG CTGCTGCCCT GTTCTCCCAA
GCCGCCTCGC AGGGCCATGC GCAGGCAGGC CAGATGCTCG ACAGCATTCA GTTGAGTTCG
GCCGAACTGC CCGCCTGTGT GACGCAGGCC CAATTGCCCG AGAAGGCGCC AACACGCGTT
TTTCAGGATC TGCAACTCGA CATGGCGTCT GGCAACATGC CCTCCATCGA GCACTTTCTG
CAGGCCCTGC CGGCCCGCAA ACGCTGGGTG ATTCCGCTGG CAACAACGCT GAGCGCCTGG
TATTCGCTCG ATCCCCGGCT GGTCCTCTCC GTCATTGCGG TGGAGTCCAA CTTCGAGTCC
GGCGCCCAGT CGCCCAAGGC GGCCATGGGG CTCATGCAGC TGATTCCCGG CACCGCCGAG
CGCTTCAATG TGCGCAACGC CTACAACGCC ACCCAGAACA TGCGCGGCGG CATGGCCTAC
CTGCGCTGGC TGCTCGCCTA CTACCGCGGC AATATCGCCT ATACGCTGGC CGCCTACAAC
GCCGGAGAGG GCCGGGTAGA CCGCTACAAG GGCATACCGC CCTACCCTGA AACCCGTGCC
TATGTGCGCC GCGTGATGGG CCTGTACGGG CGCAGCAGCC ACGAGTTTGA CGAGAACATC
ACCGATGCCT CGCCCTGGCT GCGACCCAAA GTCCCCTGA
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| Protein sequence | MKSVPAGWPL GSMGVIGAIG LVWAAGSALA QAPRALEAAA LQTPAAVLAD EPPALRRLMQ
QAGELESAVD TNDNAWRAAV LYCEASRSGS IEGQYRLGVL YAFGKGVPES RPLAAALFSQ
AASQGHAQAG QMLDSIQLSS AELPACVTQA QLPEKAPTRV FQDLQLDMAS GNMPSIEHFL
QALPARKRWV IPLATTLSAW YSLDPRLVLS VIAVESNFES GAQSPKAAMG LMQLIPGTAE
RFNVRNAYNA TQNMRGGMAY LRWLLAYYRG NIAYTLAAYN AGEGRVDRYK GIPPYPETRA
YVRRVMGLYG RSSHEFDENI TDASPWLRPK VP
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