Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0170 |
Symbol | |
ID | 4012214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 184025 |
End bp | 185926 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637939854 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_547033 |
Protein GI | 91786081 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTTCAT CGCCTGTTTC TTCATCCCGG TCTTTATCCC GGCCGACCCC GTTGGACATT CTGGGTCAGG TCTTTGGCTA CTCCGAGTTC CGCGGCCCGC AGGAAGCCAT CGTGGAACAC GTGGTGCAGG GCGGCGACGC GCTGGTGCTG ATGCCTACCG GCGGGGGCAA GTCGCTGTGC TATCAGATCC CGGCCATCGT GCGGCAAAAC GCCGGCCATG GCGTGACGGT GGTGATTTCG CCGCTGATTG CGCTGATGCA CGACCAGGTC GGCGCGCTGC ATGAGGCCGG CGTGTCCGCC GCGTTTTTGA ATTCAACGCA AAGCTTTGAA GAAAGCAGCC AGCTTGAAAA ACAGTTGCTG CGCAACGAGC TGACGCTGCT GTACGCGGCG CCCGAACGCA TCAACACGCC GCGCATGAAG GGCCTGCTGG CCTCGCTGCA CGAGCGCGGC CTACTCAGCC TGTTTGCGAT CGACGAGGCG CATTGCGTGA GCCAGTGGGG CCATGATTTC CGGCCGGAGT ACCGCTCCCT GAGCCTGCTG CACGAAACCT TTCCCGATGT GCCGCGCATC GCGCTCACGG CCACCGCCGA CGCCCTGACG CGGCAGGACA TGATTGAGCG GCTCAAGCTT GAAGACGCGC GCGAGTTTGT CAGCAGCTTT GACCGGCCCA ACATCCGCTA CACCATTGTC GAAAAGGCCG ACCCGACGCG CCAGCTGCTG CGCTTCATCG AGTCCGAGCA TGAGGGCGAG GCCGGCATTG TGTATTGCCA GTCAAGGAAG CGCGTGGAAG AGATTGCCGC AACCCTGCAG GATGCCGGCC TGAAGGCGCT GGCTTACCAC GCAGGGCTGG ACGCCTCGCT GCGCCAGCAG CGGCAAGACC GCTTCCTGCG CGAGGACGGC GTCGTCATGG TGGCGACAAT TGCCTTCGGC ATGGGCATTG ACAAGCCCGA CGTGCGCTTT GTCGCGCACC TGGACATGCC GAAAAACATC GAAGGCTATT ACCAGGAGAC GGGCCGGGCC GGGCGCGATG GGCTGCCCGC CAACGCCTGG ATGGCCTACG GCCTGCAGGA CGTGGTGAAC CAGCGCCGCA TGATAGACAC CAGCGATGCC GCCAGCGAAG AGTTCAAGCA GGTGATGCGC GGCAAGCTCG ATGCGCTCTT GAGCCTGGCC GAAGACACGC GCTGCCGCCG CGTCAGCCTG CTGCATTACT TTGACGAGGA AAGCCAACCT TGCGGCAACT GCGACAACTG TCTCAGCCCG CCGGCCGTCT GGGACGCCAC CGAAGCGGCC CGCAAAATGC TCAGCTGCAT CTACCGCGTG CAGCAGGCCA GCGGCATCAG TTTTGGCGCC GGCCACATCA TGGATATCCT GCGCGGCAAG GCCACCGAGA AAGTGGCGCA ATACGGCCAC GACAAGCTCA GCACCTTCGG TATTGGCACC GATCTGGCCG AGGCGCAGTG GCGCAGCGTG CTGCGCCAGC TGATTGCGAA AAACATGGTC CGCGTCGACA CGGAAGCCTT CAGCACGCTG CAGCTGCTGC CCGATGCCCG GCAGGTGCTC AAGGGCGAGG TCAGCGTGGT GCTGCGCGAG CAGGCCCTGG GCGGCAAGGC CGACCGCCGC AAGCGCGTGA CCAAGACCTC CGTCAAGGGC CTGGCCGAAG CCGCGCTCAA TGCCGGCGCG CTGGAACGGC TGGCCAGCCT CAAGGCCTGG CGCGCCGAGG TGGCGCGCGA GCACAACTTG CCGGCGTTCG TGATCTTTCA CGACGCCACG CTGCGCGCCA TTGCCGAGCG CGCACCGCAG CGCCTGCACG ACCTGGAAGG GATCAGCGGG ATTGGCGCGA AAAAGCTGGA AGCCTATGGC GCCGAGGTGC TGCGGGTCTG CGTGGCCCCG GCGGCAGGCT GA
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Protein sequence | MSSSPVSSSR SLSRPTPLDI LGQVFGYSEF RGPQEAIVEH VVQGGDALVL MPTGGGKSLC YQIPAIVRQN AGHGVTVVIS PLIALMHDQV GALHEAGVSA AFLNSTQSFE ESSQLEKQLL RNELTLLYAA PERINTPRMK GLLASLHERG LLSLFAIDEA HCVSQWGHDF RPEYRSLSLL HETFPDVPRI ALTATADALT RQDMIERLKL EDAREFVSSF DRPNIRYTIV EKADPTRQLL RFIESEHEGE AGIVYCQSRK RVEEIAATLQ DAGLKALAYH AGLDASLRQQ RQDRFLREDG VVMVATIAFG MGIDKPDVRF VAHLDMPKNI EGYYQETGRA GRDGLPANAW MAYGLQDVVN QRRMIDTSDA ASEEFKQVMR GKLDALLSLA EDTRCRRVSL LHYFDEESQP CGNCDNCLSP PAVWDATEAA RKMLSCIYRV QQASGISFGA GHIMDILRGK ATEKVAQYGH DKLSTFGIGT DLAEAQWRSV LRQLIAKNMV RVDTEAFSTL QLLPDARQVL KGEVSVVLRE QALGGKADRR KRVTKTSVKG LAEAALNAGA LERLASLKAW RAEVAREHNL PAFVIFHDAT LRAIAERAPQ RLHDLEGISG IGAKKLEAYG AEVLRVCVAP AAG
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