Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0158 |
Symbol | |
ID | 4012202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 169670 |
End bp | 170698 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637939842 |
Product | LysR family transcriptional regulator |
Protein accession | YP_547021 |
Protein GI | 91786069 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000138303 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.930835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTCA CAATGGTGAT ATACAAGTCG ATCCAAACCA TGCCACCTGG CCCGCTGACG AAGGAGCGCC CCTTGAACCC AACCAACTTC CGTACCCTCG ATCTGAACCT CCTGCGCGTG TTTGACGAGG TCATGGCCGA ACGCAGCCTG ACACGGGCGG CGCGCAATCT GTCGCTGACC CAGCCGGCCG TGAGCAATGC GCTACGCCGC CTGCGCGAGA CGCTGGGAGA CGAGTTGGTG CAGCGCAGCG GTCAGGGCAT GGCGCCCACG CCCCGCGCGC GCGCCATCTG GCCGGCGGTG CGGGAAGCCC TGCAGCGGCT GCAGGAATCG CTGATCCCCG ACGAATTTGT GCCCGGCCAA GCCACCACCA CCTTTGTGCT GGCCATGGCC GATGCCACGG CAGCCGAACT GATACCAGGG CTGATCGAGA CGCTGGAGCA GGAGGCGCCG GGGGTGTCGA TGCGGGTGAT ACCGCTGACC ACGCGCGACC CGCGGCGCCT GTTGGACGAG CAAGCCTGCG ATCTGGCCGT CGGCTATTTC CCCTCGGTGC TGGCCGACCT GACGGCCCAC GCCCAGAGCG GCGAGCCCAT GCCCTTCCAG CATCGGCGAC TGTATGACGG CGAGTATGTC TGCGTGATGC GCAAGGGGCA CCCGCTGGCC AGCGGGCCCC TGACGCTCGA CCGCTTCTGC GCCGCGCGGC ACATGCTGGT CAGTTTTTCA GGCCGGCCCT ATGGCTTTAT TGATGAGTCG CTGGCCTCGC TGGGAAGAGA ACGTCAGGTG GTGCTAACCG TCAACCAGTT CTTCACGGCG GGGCGGGTGG TGGCCAACTC CAACCTCCTG ACGGTGTTGC CGCGCCATTT TGTGCGCGTC ACCGGTATCG CTGAGCAGTT GGTGCTGCGT CCCCTGCCCT TTGACGTGTC GGCGGTGCAT GTGGATGCGG TGTGGCATCG CCGCTCGCAA CAACGCGGCG CCCATGTGTG GCTGCGCGAG GCGGTCCTGC GGGCGGCCGA CAAGGCCTTT TCGAATTGA
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Protein sequence | MSFTMVIYKS IQTMPPGPLT KERPLNPTNF RTLDLNLLRV FDEVMAERSL TRAARNLSLT QPAVSNALRR LRETLGDELV QRSGQGMAPT PRARAIWPAV REALQRLQES LIPDEFVPGQ ATTTFVLAMA DATAAELIPG LIETLEQEAP GVSMRVIPLT TRDPRRLLDE QACDLAVGYF PSVLADLTAH AQSGEPMPFQ HRRLYDGEYV CVMRKGHPLA SGPLTLDRFC AARHMLVSFS GRPYGFIDES LASLGRERQV VLTVNQFFTA GRVVANSNLL TVLPRHFVRV TGIAEQLVLR PLPFDVSAVH VDAVWHRRSQ QRGAHVWLRE AVLRAADKAF SN
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