| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0126 |
|---|
| Symbol | |
|---|
| ID | 4012326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 128541 |
|---|
| End bp | 129101 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637939810 |
|---|
| Product | flavin reductase-like, FMN-binding |
|---|
| Protein accession | YP_546989 |
|---|
| Protein GI | 91786037 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.765055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGGTG CGCTTCAAGC GCTTCAGTTA AATTACCCGT CTATGCCGAC CCCTTCCATT
CCGCGCAAAG CGAGCAGTCC CAGCTTTTCC CAACGAGAGT TCCGGGCCTC GCTGGCCATG
TTTGCCACCG GGGTCACCAT CGTCACCGCG CGCACGCCGG CCGGCGTGCT GGTCGGCCTG
ACGGCCAACT CCTTTAATTC GGTGTCGCTC AACCCGCCCC TGGTCCTCTG GAGCCTGGCG
CAGGCAGCGG GCTCCATGGC TGCGCTGAGC GCCGGGTCGC ACTACGCCAT CAACATCCTG
GCGGCGGATC AGAAAGCGCT GGCCGAACGC TTTGCCAGCC GGCGCGAAGA CCGCTGGGCG
GACGTGCTGT TCACCGAAGG CGCGAGCGGC TCTCCCCTGC TCAGCGGCGC GGCCGCCACC
TTCGAATGCT TCAACCGCAG CCGCTACGAG GAAGGCGACC ACGTGATCTT CGTCGGCGAA
GTGGAGCGCT GCAGCCATCG CGCTGGCGCA GCGCCGCTGC TGTTTCACGG CGGCAGGTTC
TACACCGAGC ACCCTTTGTG A
|
|---|
| Protein sequence | MAGALQALQL NYPSMPTPSI PRKASSPSFS QREFRASLAM FATGVTIVTA RTPAGVLVGL
TANSFNSVSL NPPLVLWSLA QAAGSMAALS AGSHYAINIL AADQKALAER FASRREDRWA
DVLFTEGASG SPLLSGAAAT FECFNRSRYE EGDHVIFVGE VERCSHRAGA APLLFHGGRF
YTEHPL
|
|---|
| |