| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0088 |
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| Symbol | |
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| ID | 4012249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 91762 |
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| End bp | 92757 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637939774 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_546953 |
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| Protein GI | 91786001 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAC GTTCCCGCTC TTCCCGCTCT TCCCGCGCGG TACTCGCCGC CTCTGCACTC
CTGATGGCGC TGGCCGGCAC GGCCAGCGCC CAGACCATCC TGAAGATCGG CTACACGCCG
CCCAAGGACT CGCATTACGG CGTGGGCGCC ACGACGTTCT GCGACGAAGT GGAGAAGGGC
ACGCAAGAGC GTTACAAGTG CCAGCATTTC CCCAGTTCGG CGCTGGGTGG CGAGCGCGAG
ATGATCGAAT CGGTGCAGCT CGGCACTCAG GATCTGGTCA ATACCTCGAC CGGCCCGCTG
GGCAACTTCG TGCCCGAGAC CCGTATCGTG GACATTCCCT TCCTGTTCCG CGACTACGAG
CACGCCCGCA AGGTGATGGA TGGTGCGATC GGCCAGGACC TGCTGAAAAA GATGCAGGCC
AAGGGCCTGA TCGGCCTGGC ATGGACAGAA AACGGCTTTC GCCACATGAC GAACAGCAAG
CGGCCTATCC TGCAGGCGAG TGATGCGGCC GGCCTGAAGG TTCGCACCAT GGAGAACAAG
GTCCACATGG ACGGCTACAA GACCTTCGGC CTGCTGCCTA CACCGATGGC CTTTCCGGAA
CTGTTCACGG CGCTGCAGCA GGGCACGGTG GACGGCCAGG AGAACCCGAT ACCGGTGATC
CTTTCGTCCA AGTTCTCGCA GGTCCAGAAA CACCTCTCGC TGACGGGCCA TGTCTATTCA
CCAGCGGTGC TGATCCTGTC GTCCAGGGTC TGGGACAAGC TGTCCGAGGC CGATAAAAAG
GTCTTCGTTG CGGCGGCGCA GAAAGCCACG GTCGCGCAGC GCAAACGCGT CAACGACGAC
GAGGCCAACG GCATCACCCA GCTGAAGAAG GACGGCATGC AGGTGGTTGA AAAGGTCGAC
GGAGAAAGTT TCCGCAAGGC CGTGGCGCCT GCCTACGCCG GCTTCGCCAA GGAGTTCGGT
GCCGAGCGCA TCGCCGCCAT CCAGGCCGTG AAATAA
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| Protein sequence | MTPRSRSSRS SRAVLAASAL LMALAGTASA QTILKIGYTP PKDSHYGVGA TTFCDEVEKG
TQERYKCQHF PSSALGGERE MIESVQLGTQ DLVNTSTGPL GNFVPETRIV DIPFLFRDYE
HARKVMDGAI GQDLLKKMQA KGLIGLAWTE NGFRHMTNSK RPILQASDAA GLKVRTMENK
VHMDGYKTFG LLPTPMAFPE LFTALQQGTV DGQENPIPVI LSSKFSQVQK HLSLTGHVYS
PAVLILSSRV WDKLSEADKK VFVAAAQKAT VAQRKRVNDD EANGITQLKK DGMQVVEKVD
GESFRKAVAP AYAGFAKEFG AERIAAIQAV K
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